RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 PTGFRNQ9P2B2 879 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 UPB1Q9UBR1 384 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 UBQLN2Q9UHD9 624 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 CRLS1Q9UJA2 301 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 RIMS3Q9UJD0 308 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 KLK13Q9UKR3 277 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 SLC5A6Q9Y289 635 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 CBY1Q9Y3M2 126 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 TCAF1Q9Y4C2 921 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 RNF114Q9Y508 228 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ASB4Q9Y574 426 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 MAB21L2Q9Y586 359 aa4.23□□□□□ -1.73
SF3B1-202ENST00000409915 ARID1BQ8NFD5 2236 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 WDFY3Q8IZQ1 3526 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 PRAMEF33A0A0G2JMD5 474 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 A0A1W2PPW3 197 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 A0A1W2PRX2 142 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 CPED1A4D0V7 1026 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 NEMP2A6NFY4 417 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 MROH6A6NGR9 719 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 SAGE2PA6NJ88 616 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ERI2A8K979 691 aaKnown RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 C12orf71A8MTZ7 269 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 NPIPB11E5RHQ5 1161 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 E9PI62 339 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 J3QRK9 145 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 K7EQM0 130 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 FFAR3O14843 346 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 SMAD9O15198 467 aaKnown RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 PPM1DO15297 605 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 GPR42O15529 346 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 PSMD3O43242 534 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 GRID2O43424 1007 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TLX2O43763 284 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 LANCL1O43813 399 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 NOBOXO60393 691 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 CIDEAO60543 219 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 SERPINI2O75830 405 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 RBBP9O75884 186 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 NADKO95544 446 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 SERPINA3P01011 423 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 IGHEP01854 428 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TFP02787 698 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ADRB1P08588 477 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 HOXB5P09067 269 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 CLUP10909 449 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ENO3P13929 434 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 CREB1P16220 341 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF182P17025 639 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF26P17031 533 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 CKMT2P17540 419 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 LBPP18428 481 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TPSB2P20231 275 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 MSH3P20585 1137 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ITGALP20701 1170 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ADRA1DP25100 572 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 NMBRP28336 390 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 SERPINB1P30740 379 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 OTX2P32243 289 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 CAPGP40121 348 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 POU3F4P49335 361 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ARHGDIAP52565 204 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ATP5IP56385 69 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 COPZ1P61923 177 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 PRR5P85299 388 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 IFITM3Q01628 133 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 BNIP2Q12982 314 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 NFATC2Q13469 925 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TOP3AQ13472 1001 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 PDE7AQ13946 482 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 NCF4Q15080 339 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TRIP10Q15642 601 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TPSAB1Q15661 275 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 SGCAQ16586 387 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 HIST2H2ACQ16777 129 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ST3GAL2Q16842 350 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 SLC36A3Q495N2 470 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 FGD3Q5JSP0 725 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 FNBP1LQ5T0N5 605 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 LRIF1Q5T3J3 769 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TSTD2Q5T7W7 516 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 LPCAT4Q643R3 524 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ANKS6Q68DC2 871 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 PDPK2PQ6A1A2 396 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ELP2Q6IA86 826 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF544Q6NX49 715 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TMEM65Q6PI78 240 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 TMEM220Q6QAJ8 160 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 CD300LDQ6UXZ3 194 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 CREB3L2Q70SY1 520 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 EFL1Q7Z2Z2 1120 aaKnown RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 LDB1Q86U70 411 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 SERPINA9Q86WD7 417 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF761Q86XN6 746 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-202ENST00000409915 GKN2Q86XP6 184 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF547Q8IVP9 402 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 GPALPP1Q8IXQ4 340 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF595Q8IYB9 648 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 UBE2J2Q8N2K1 259 aa4.22□□□□□ -1.73
SF3B1-202ENST00000409915 ABHD11Q8NFV4 315 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms