RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 HACD4Q5VWC8 232 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 WBP2NLQ6ICG8 309 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 LSMEM2Q8N112 164 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 OR5D14Q8NGL3 314 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 ARL11Q969Q4 196 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 CHRDQ9H2X0 955 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 UBQLN4Q9NRR5 601 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 PLEKHJ1Q9NW61 149 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 ABRACLQ9P1F3 81 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 CBLCQ9ULV8 474 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 ADAM12O43184 909 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 GYPBP06028 91 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 FXYD4P59646 89 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 PTPRRQ15256 657 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 OR1Q1Q15612 314 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 MRPL21Q7Z2W9 205 aaKnown RBP15.04■□□□□ -0
COL2A1-202ENST00000380518 LRRC28Q86X40 367 aaPredicted RBP15.04■□□□□ -0
COL2A1-202ENST00000380518 RNF175Q8N4F7 328 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 OR14K1Q8NGZ2 314 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 PRRT1Q99946 306 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 SULT4A1Q9BR01 284 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 PLEK2Q9NYT0 353 aa15.04■□□□□ -0
COL2A1-202ENST00000380518 TESQ9UGI8 421 aaKnown RBP15.04■□□□□ -0
COL2A1-202ENST00000380518 TRAV27A0A087WT01 109 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 RFPL3O75679 317 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 GJB3O75712 270 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 TNFRSF4P43489 277 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 ALDH3B2P48448 385 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 TSPAN31Q12999 210 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 MEF2DQ14814 521 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 DCUN1D4Q92564 292 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 RADILQ96JH8 1075 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 MFFQ9GZY8 342 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 SLC6A14Q9UN76 642 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 HS3ST2Q9Y278 367 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 B3GALT1Q9Y5Z6 326 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 SLC22A7Q9Y694 548 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 A0A1W2PQ09 198 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 CPNE6O95741 557 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 TACR1P25103 407 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 TNFSF8P32971 234 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 SERPINA12Q8IW75 414 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 LILRB2Q8N423 598 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 FOXRED1Q96CU9 486 aaPredicted RBP15.03■□□□□ -0
COL2A1-202ENST00000380518 RPH3AQ9Y2J0 694 aaPredicted RBP15.03■□□□□ -0
COL2A1-202ENST00000380518 ADAM18Q9Y3Q7 739 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 SLC16A7O60669 478 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 SCGB2A1O75556 95 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 SLC2A12Q8TD20 617 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 MYH15Q9Y2K3 1946 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 CITO14578 2027 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 SRPX2O60687 465 aaPredicted RBP15.03■□□□□ -0
COL2A1-202ENST00000380518 ACTL6BO94805 426 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 TP53P04637 393 aaPredicted RBP15.03■□□□□ -0
COL2A1-202ENST00000380518 NUDT7P0C024 238 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 FOLR3P41439 243 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 OR5K2Q8NHB8 316 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 TBC1D20Q96BZ9 403 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 TOE1Q96GM8 510 aaKnown RBP15.03■□□□□ -0
COL2A1-202ENST00000380518 MS4A4AQ96JQ5 239 aa15.03■□□□□ -0
COL2A1-202ENST00000380518 LSM5Q9Y4Y9 91 aaKnown RBP15.03■□□□□ -0
COL2A1-202ENST00000380518 MEIOCA2RUB1 952 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 SPDEFO95238 335 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 PVRP15151 417 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 MSX1P28360 303 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 CSNK1A1P48729 337 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 TPRA1Q86W33 373 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 ZNF695Q8IW36 515 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 OR7G2Q8NG99 324 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 SGCZQ96LD1 299 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 ZNF583Q96ND8 569 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 ZNF334Q9HCZ1 680 aaPredicted RBP15.02■□□□□ -0
COL2A1-202ENST00000380518 KDM3BQ7LBC6 1761 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 GPRIN2O60269 458 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 HPGDSO60760 199 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 GAAP10253 952 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 NFATC4Q14934 902 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 TSSK4Q6SA08 328 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 RHOXF1Q8NHV9 184 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 PPP1R35Q8TAP8 253 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 RHBDD3Q9Y3P4 386 aa15.02■□□□□ -0
COL2A1-202ENST00000380518 A0A1B0GV50 99 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 SERPINE2P07093 398 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 DLSTP36957 453 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 DLX5P56178 289 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 GK2Q14410 553 aaPredicted RBP15.02□□□□□ -0.01
COL2A1-202ENST00000380518 P2RY14Q15391 338 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 SMN1Q16637 294 aaKnown RBP15.02□□□□□ -0.01
COL2A1-202ENST00000380518 MYLIPQ8WY64 445 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 OR10A5Q9H207 317 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 OR10A2Q9H208 303 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 PTPN6P29350 595 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 SPRED1Q7Z699 444 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 DNAJC22Q8N4W6 341 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 OR2A12Q8NGT7 310 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 OR9A4Q8NGU2 314 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 UBTD2Q8WUN7 234 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 PFDN5Q99471 154 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 ST6GALNAC5Q9BVH7 336 aa15.02□□□□□ -0.01
COL2A1-202ENST00000380518 CD207Q9UJ71 328 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms