RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 hCG_1807616A0A1W2PRN6 198 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 TVP23AA6NH52 213 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 ZNF670-ZNF695F2Z2N8 137 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 NDUFB2O95178 105 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 ITGA5P08648 1049 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 STSP08842 583 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 PYCR1P32322 319 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 MAGEA8P43361 318 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 CAPZA1P52907 286 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 TGFBR3Q03167 851 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 MFSD13AQ14CX5 517 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 SF3B4Q15427 424 aaKnown RBP eCLIP7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 NKG7Q16617 165 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 SPRED3Q2MJR0 410 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 FCRL6Q6DN72 434 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 WBP2NLQ6ICG8 309 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 HACD2Q6Y1H2 254 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 ZER1Q7Z7L7 766 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 SAP25Q8TEE9 199 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 NR4A3Q92570 626 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 MROQ9BYG7 248 aa7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 YARS2Q9Y2Z4 477 aaKnown RBP7.84□□□□□ -1.15
CRNKL1-202ENST00000377340 FAM183AA6NL82 134 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 H0YC42 278 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 PRRG2O14669 202 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ATE1O95260 518 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 CDK4P11802 303 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 IL32P24001 234 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 CRISP1P54107 249 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 NR1H2P55055 460 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 CARD18P57730 90 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 SCN1BQ07699 218 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 QPRTQ15274 297 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 DGUOKQ16854 277 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 B3GNTL1Q67FW5 361 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ZNF101Q8IZC7 436 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ZNF611Q8N823 705 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 MPP4Q96JB8 637 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 LRFN3Q9BTN0 628 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ARMC1Q9NVT9 282 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 NKIRAS2Q9NYR9 191 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 COQ3Q9NZJ6 369 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 C19orf53Q9UNZ5 99 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 THSD7BQ9C0I4 1608 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 PKDREJQ9NTG1 2253 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ANKRD28O15084 1053 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 SUSD5O60279 629 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 CKMT1AP12532 417 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ETS2P15036 469 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 CELP19835 753 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 TRHRP34981 398 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 IDUAP35475 653 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 STT3AP46977 705 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 PPIAP62937 165 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 RNF4P78317 190 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 RIPK1Q13546 671 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 CAMK2DQ13557 499 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 MYBPC3Q14896 1274 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 SLC10A1Q14973 349 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ARMCX4Q5H9R4 360 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 OVCH1Q7RTY7 1134 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 SLC22A16Q86VW1 577 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 KLHL36Q8N4N3 616 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 SDR9C7Q8NEX9 313 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 OR4N2Q8NGD1 307 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 CNIH3Q8TBE1 160 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 SLC35A4Q96G79 324 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ZNF583Q96ND8 569 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 TMED9Q9BVK6 235 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ZNF225Q9UK10 706 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 A0A1W2PNR3 127 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 AGAP14A8MT82 685 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 UPK1AO00322 258 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 CASC3O15234 703 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 KLK8O60259 260 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ZNF806P0C7X5 589 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 EFNA3P52797 238 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 TXNL4AP83876 142 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 CCNIQ14094 377 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 COL28A1Q2UY09 1125 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 XKR7Q5GH72 579 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 HDDC2Q7Z4H3 204 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 SETD6Q8TBK2 473 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 BRIX1Q8TDN6 353 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ZMYND19Q96E35 227 aaPredicted RBP7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 NEURL3Q96EH8 262 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 NUDT9Q9BW91 350 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 C1QTNF6Q9BXI9 259 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 B3GNT4Q9C0J1 378 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 ENKD1Q9H0I2 346 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 DCAF13Q9NV06 445 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 PLEK2Q9NYT0 353 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 KLHL13Q9P2N7 655 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 PAIP2BQ9ULR5 123 aaKnown RBP7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 PTPN13Q12923 2485 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 A0A1B0GVI7 797 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 PCDH17O14917 1159 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 SLC16A7O60669 478 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 HCKP08631 526 aa7.83□□□□□ -1.16
CRNKL1-202ENST00000377340 RPL5P46777 297 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms