RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Tsr3Q5HZH2 323 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Dvl2Q60838 736 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr11Q60890 313 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Slc17a6Q8BLE7 582 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Ankrd46Q8BTZ5 228 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Gins1Q9CZ15 196 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Rps19Q9CZX8 145 aaKnown RBP17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 SpdefQ9WTP3 325 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Sema4gQ9WUH7 837 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Abca4O35600 2310 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr1023A2ASU6 311 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Gm21876F6XK35 94 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Brcc3P46737 291 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Rab11aP62492 216 aaKnown RBP17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Btn1a1Q62556 524 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Fem1abQ8C0T1 654 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Ankmy1Q8C0W1 906 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Dnajc5bQ9CQ94 199 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Fndc8Q9D2H8 321 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Slc6a14Q9JMA9 638 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 OtofQ9ESF1 1997 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 P03987 398 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Pwwp2aQ69Z61 730 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr1225Q7TR01 311 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Tspan11Q9D1D1 253 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 TollipQ9QZ06 274 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Bcl3Q9Z2F6 448 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Vmn2r13L7N1X2 831 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Atp1b2P14231 290 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 SobpQ0P5V2 864 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr1036Q7TR85 310 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 MslnlQ8C160 685 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Plcxd1Q8CHS4 345 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Slc16a14Q8K1C7 512 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 NrmQ8VC65 262 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Pcdhac2Q91Y09 1006 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr103Q920Y8 313 aa17.48■□□□□ 0.39
Trim71-201ENSMUST00000111816 St8sia2O35696 375 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Scrg1O88745 98 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Gabra3P26049 492 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Hes1P35428 282 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 EvlP70429 414 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr871Q7TRF0 311 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Xkr8Q8C0T0 401 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 MpiQ924M7 423 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Uba1yP31254 1058 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 PtnP63089 168 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Nmnat2Q8BNJ3 307 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Mef2cQ8CFN5 474 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Apobec3Q99J72 440 aaKnown RBP17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 EfsQ64355 560 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Rhbdd3Q8BP97 385 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Gtdc1Q8BW56 445 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Ttc32Q9DAC7 148 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Cdc20bD3Z3I0 519 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Vmn2r11E9Q4X4 861 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Cd44P15379 778 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 PfkmP47857 780 aaKnown RBP17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Chst4Q9R1I1 388 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Wnt4P22724 351 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Rasd2P63032 266 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Znf583Q3V080 568 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Ephx3Q3V1F8 367 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 TpppQ7TQD2 218 aaKnown RBP17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Zfp62Q8C827 914 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Piwil4Q8CGT6 848 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Sdcbp2Q99JZ0 292 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Eif3fQ9DCH4 361 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Sorcs2Q9EPR5 1159 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Fibcd1A2AV25 459 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Vmn2r76E9Q3F5 853 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr889L7N1Y6 314 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Prl6a1O35257 230 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Rasd1O35626 280 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Il3P01586 166 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 ZyxQ62523 564 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Zfp157Q6PCM4 567 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr1463Q7TQR3 310 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Ppp1r15bQ8BFW3 697 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Slc35d3Q8BGF8 422 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr1389Q8VGX0 311 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Mpped2Q9CZJ0 294 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Loxl3Q9Z175 754 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Fem1aaQ9Z2G1 654 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr588-ps1A0A1B0GSZ2 313 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Nmur1O55040 428 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 PmchP56942 165 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr382Q8VF79 312 aa17.47■□□□□ 0.39
Trim71-201ENSMUST00000111816 Gm15056F6ZR08 88 aa17.46■□□□□ 0.39
Trim71-201ENSMUST00000111816 Prps1l3G3UXL2 318 aa17.46■□□□□ 0.39
Trim71-201ENSMUST00000111816 RelbQ04863 558 aa17.46■□□□□ 0.39
Trim71-201ENSMUST00000111816 Fbxw11Q5SRY7 542 aaKnown RBP17.46■□□□□ 0.39
Trim71-201ENSMUST00000111816 Prss34Q80UR4 318 aa17.46■□□□□ 0.39
Trim71-201ENSMUST00000111816 SptssaQ8R207 71 aa17.46■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr1278Q8VF39 313 aa17.46■□□□□ 0.39
Trim71-201ENSMUST00000111816 Olfr732Q8VFT5 308 aa17.46■□□□□ 0.39
Trim71-201ENSMUST00000111816 GrifinQ9D1U0 144 aa17.46■□□□□ 0.39
Trim71-201ENSMUST00000111816 Prps1Q9D7G0 318 aa17.46■□□□□ 0.39
Trim71-201ENSMUST00000111816 Rarres1F6ZIS7 283 aa17.46■□□□□ 0.39
Trim71-201ENSMUST00000111816 Rplp1P47955 114 aa17.46■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms