RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Tmem64Q3U145 381 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Fam196aQ3USH1 422 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Hs6st2Q80UW0 612 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Olfr729Q8VET4 323 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Olfr812Q8VG64 310 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Atp6v1g1Q9CR51 118 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Ndufaf4Q9D1H6 173 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Upk3bl1Q9D701 249 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Tmem174Q9DCX7 243 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Gal3st1Q9JHE4 423 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Nxt1Q9QZV9 140 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Btaf1E9QAE3 1848 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Scgb2b3D2XZ38 112 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Fam84bD3YXJ5 310 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 FauP35545 74 aaKnown RBP13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Cdh11P55288 796 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Pou3f4P62515 361 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Drd1Q61616 446 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Eid2Q6X7S9 236 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Coq4Q8BGB8 266 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Zc3h12dQ8BIY3 533 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Fbxl22Q8C7B6 236 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 FbrsQ8R089 466 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Vmn1r28Q8R2C9 302 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Olfr437Q8VEV1 310 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Olfr561Q8VGZ6 314 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Znrf4Q9DAH2 327 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Gstp3F6RWR5 210 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 E2f3O35261 457 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Adra2bP30545 450 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Ccr1l1P51676 356 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Garem1Q3UFT3 876 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Csnk2a1Q60737 391 aaKnown RBP13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Olfr1115Q7TR53 326 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Tspan9Q8BJU2 239 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 LsampQ8BLK3 341 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Synpo2lQ8BWB1 975 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Slc43a2Q8CGA3 568 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Plcxd1Q8CHS4 345 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Dyrk3Q922Y0 586 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Akirin1Q99LF1 191 aa13.4□□□□□ -0.26
Col2a1-202ENSMUST00000088355 Smchd1Q6P5D8 2007 aaKnown RBP13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Ighv16-1A0A0A6YW39 117 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Dbx2F8VQH7 377 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Vmn2r109K7N747 858 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Zfp1P08042 402 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Cd38P56528 304 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Gabrb3P63080 473 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Tsr3Q5HZH2 323 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Zc3hc1Q80YV2 501 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Prkd2Q8BZ03 875 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Fbxl3Q8C4V4 428 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Krtcap3Q8K177 240 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 MallQ91X49 154 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Ier3ip1Q9CR20 82 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Tssk4Q9D411 328 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Olfr1121L7MTT1 314 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Hoxa9P09631 271 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Hoxc5P32043 222 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Tie1Q06806 1134 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Them4Q3UUI3 230 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Tas2r135Q7TQA9 312 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Rgs7bpQ8BQP9 257 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Ptges2Q8BWM0 384 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 WrbQ8K0D7 174 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Usb1Q91W78 267 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 HadhbQ99JY0 475 aaKnown RBP13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Rassf1Q99MK9 340 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Usp18Q9WTV6 368 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Ndor1A2AI05 598 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Slc25a25A2ASZ8 469 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Atxn7l3A2AWT3 347 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Gm14692A2BH01 229 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Apoc1P34928 88 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Clec10aP49300 304 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Gabarapl2P60521 117 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Dusp5Q1HL35 384 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Pan3Q640Q5 837 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Fbxo34Q80XI1 695 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Ankrd9Q8BH83 326 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Banf2Q8BVR0 90 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Armcx6Q8K3A6 301 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Vmn1r200Q8R281 312 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Lsm1Q8VC85 133 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Olfr165Q8VFA2 313 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Tnfrsf22Q9ER62 198 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Raet1dQ9JI58 249 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Nup188Q6ZQH8 1759 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Slc37a4A0A1L1SUI3 450 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 H60cB1B213 197 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 RfngO09009 332 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Phox2bO35690 314 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 KitlgP20826 273 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Etv4P28322 485 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Cds1P98191 461 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Dcaf12Q8BGZ3 453 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Kcnmb1Q8CAE3 191 aa13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 DenrQ9CQJ6 198 aaKnown RBP13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Mrpl21Q9D1N9 209 aaKnown RBP13.39□□□□□ -0.27
Col2a1-202ENSMUST00000088355 Dusp3Q9D7X3 185 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms