Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm25239-201ENSMUST00000174915 86 ntBASIC41.21■■■■■ 4.19
Fam196aQ3USH1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.42■■■■□ 3.74
Fam196aQ3USH1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
Fam196aQ3USH1 Gm24109-201ENSMUST00000175489 103 ntBASIC36.07■■■■□ 3.36
Fam196aQ3USH1 Gm15042-201ENSMUST00000120212 883 ntBASIC35.38■■■■□ 3.25
Fam196aQ3USH1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
Fam196aQ3USH1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Fam196aQ3USH1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Fam196aQ3USH1 Gm15045-201ENSMUST00000117359 883 ntBASIC34.44■■■■□ 3.1
Fam196aQ3USH1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Fam196aQ3USH1 Gm23366-201ENSMUST00000175022 89 ntBASIC34.36■■■■□ 3.09
Fam196aQ3USH1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.86■■■■□ 3.01
Fam196aQ3USH1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.59■■■□□ 2.97
Fam196aQ3USH1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Fam196aQ3USH1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Fam196aQ3USH1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.43■■■□□ 2.94
Fam196aQ3USH1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Fam196aQ3USH1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Fam196aQ3USH1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.84■■■□□ 2.85
Fam196aQ3USH1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
Fam196aQ3USH1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Fam196aQ3USH1 Gm25238-201ENSMUST00000174914 89 ntBASIC32.72■■■□□ 2.83
Fam196aQ3USH1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.08■■■□□ 2.73
Fam196aQ3USH1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Fam196aQ3USH1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
Fam196aQ3USH1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Fam196aQ3USH1 Gm25262-201ENSMUST00000174934 133 ntBASIC31.73■■■□□ 2.67
Fam196aQ3USH1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Fam196aQ3USH1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.61■■■□□ 2.65
Fam196aQ3USH1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Fam196aQ3USH1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.51■■■□□ 2.63
Fam196aQ3USH1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Fam196aQ3USH1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Fam196aQ3USH1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.31■■■□□ 2.6
Fam196aQ3USH1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.3■■■□□ 2.6
Fam196aQ3USH1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.24■■■□□ 2.59
Fam196aQ3USH1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.22■■■□□ 2.59
Fam196aQ3USH1 Gm26115-201ENSMUST00000175605 87 ntBASIC31.22■■■□□ 2.59
Fam196aQ3USH1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Fam196aQ3USH1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.13■■■□□ 2.57
Fam196aQ3USH1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
Fam196aQ3USH1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
Fam196aQ3USH1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Fam196aQ3USH1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Fam196aQ3USH1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Fam196aQ3USH1 Gm8109-201ENSMUST00000194076 746 ntBASIC30.93■■■□□ 2.54
Fam196aQ3USH1 Gm27325-201ENSMUST00000175467 74 ntBASIC30.87■■■□□ 2.53
Fam196aQ3USH1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Fam196aQ3USH1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.77■■■□□ 2.52
Fam196aQ3USH1 Rab21-202ENSMUST00000218831 843 ntBASIC30.76■■■□□ 2.51
Fam196aQ3USH1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Fam196aQ3USH1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Fam196aQ3USH1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.71■■■□□ 2.51
Fam196aQ3USH1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Fam196aQ3USH1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Fam196aQ3USH1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Fam196aQ3USH1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Fam196aQ3USH1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.3■■■□□ 2.44
Fam196aQ3USH1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.29■■■□□ 2.44
Fam196aQ3USH1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Fam196aQ3USH1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.23■■■□□ 2.43
Fam196aQ3USH1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Fam196aQ3USH1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Fam196aQ3USH1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30■■■□□ 2.39
Fam196aQ3USH1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.99■■■□□ 2.39
Fam196aQ3USH1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Fam196aQ3USH1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Fam196aQ3USH1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Fam196aQ3USH1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
Fam196aQ3USH1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.87■■■□□ 2.37
Fam196aQ3USH1 Gm24804-201ENSMUST00000174982 85 ntBASIC29.84■■■□□ 2.37
Fam196aQ3USH1 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.81■■■□□ 2.36
Fam196aQ3USH1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Fam196aQ3USH1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Fam196aQ3USH1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Fam196aQ3USH1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.7■■■□□ 2.34
Fam196aQ3USH1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Fam196aQ3USH1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
Fam196aQ3USH1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Fam196aQ3USH1 Gm27322-201ENSMUST00000184007 104 ntBASIC29.52■■■□□ 2.32
Fam196aQ3USH1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.48■■■□□ 2.31
Fam196aQ3USH1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Fam196aQ3USH1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.44■■■□□ 2.3
Fam196aQ3USH1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.39■■■□□ 2.3
Fam196aQ3USH1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
Fam196aQ3USH1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Fam196aQ3USH1 Zfp131-205ENSMUST00000223812 663 ntBASIC29.33■■■□□ 2.29
Fam196aQ3USH1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Fam196aQ3USH1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Fam196aQ3USH1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.31■■■□□ 2.28
Fam196aQ3USH1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
Fam196aQ3USH1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Fam196aQ3USH1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.28■■■□□ 2.28
Fam196aQ3USH1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.26■■■□□ 2.27
Fam196aQ3USH1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Fam196aQ3USH1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Fam196aQ3USH1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.23■■■□□ 2.27
Fam196aQ3USH1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.23■■■□□ 2.27
Fam196aQ3USH1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Fam196aQ3USH1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.14■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms