Protein–RNA interactions for Protein: Q8BWB1

Synpo2l, Synaptopodin 2-like protein, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo2lQ8BWB1 Gm25239-201ENSMUST00000174915 86 ntBASIC34,5■■■■□ 3,11
Synpo2lQ8BWB1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31,76■■■□□ 2,67
Synpo2lQ8BWB1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31,31■■■□□ 2,6
Synpo2lQ8BWB1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31,27■■■□□ 2,6
Synpo2lQ8BWB1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Synpo2lQ8BWB1 Gm15042-201ENSMUST00000120212 883 ntBASIC30,41■■■□□ 2,46
Synpo2lQ8BWB1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30,22■■■□□ 2,43
Synpo2lQ8BWB1 Gm15045-201ENSMUST00000117359 883 ntBASIC29,85■■■□□ 2,37
Synpo2lQ8BWB1 Gm24109-201ENSMUST00000175489 103 ntBASIC29,8■■■□□ 2,36
Synpo2lQ8BWB1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Synpo2lQ8BWB1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29,26■■■□□ 2,27
Synpo2lQ8BWB1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,1■■■□□ 2,25
Synpo2lQ8BWB1 Psd-208ENSMUST00000224556 2034 ntBASIC28,97■■■□□ 2,23
Synpo2lQ8BWB1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,86■■■□□ 2,21
Synpo2lQ8BWB1 Gm23366-201ENSMUST00000175022 89 ntBASIC28,8■■■□□ 2,2
Synpo2lQ8BWB1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28,7■■■□□ 2,18
Synpo2lQ8BWB1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
Synpo2lQ8BWB1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28,64■■■□□ 2,18
Synpo2lQ8BWB1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28,61■■■□□ 2,17
Synpo2lQ8BWB1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,49■■■□□ 2,15
Synpo2lQ8BWB1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28,44■■■□□ 2,14
Synpo2lQ8BWB1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,37■■■□□ 2,13
Synpo2lQ8BWB1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,36■■■□□ 2,13
Synpo2lQ8BWB1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28,25■■■□□ 2,11
Synpo2lQ8BWB1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,18■■■□□ 2,1
Synpo2lQ8BWB1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28,17■■■□□ 2,1
Synpo2lQ8BWB1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28,14■■■□□ 2,09
Synpo2lQ8BWB1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28,01■■■□□ 2,07
Synpo2lQ8BWB1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27,97■■■□□ 2,07
Synpo2lQ8BWB1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27,94■■■□□ 2,06
Synpo2lQ8BWB1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27,92■■■□□ 2,06
Synpo2lQ8BWB1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27,82■■■□□ 2,04
Synpo2lQ8BWB1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27,75■■■□□ 2,03
Synpo2lQ8BWB1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,64■■■□□ 2,02
Synpo2lQ8BWB1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27,56■■■□□ 2
Synpo2lQ8BWB1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27,34■■□□□ 1,97
Synpo2lQ8BWB1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27,34■■□□□ 1,97
Synpo2lQ8BWB1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27,31■■□□□ 1,96
Synpo2lQ8BWB1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27,29■■□□□ 1,96
Synpo2lQ8BWB1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27,26■■□□□ 1,95
Synpo2lQ8BWB1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27,25■■□□□ 1,95
Synpo2lQ8BWB1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27,24■■□□□ 1,95
Synpo2lQ8BWB1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,22■■□□□ 1,95
Synpo2lQ8BWB1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27,17■■□□□ 1,94
Synpo2lQ8BWB1 Gm25238-201ENSMUST00000174914 89 ntBASIC27,17■■□□□ 1,94
Synpo2lQ8BWB1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27,14■■□□□ 1,94
Synpo2lQ8BWB1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27,11■■□□□ 1,93
Synpo2lQ8BWB1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,05■■□□□ 1,92
Synpo2lQ8BWB1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27,01■■□□□ 1,91
Synpo2lQ8BWB1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,95■■□□□ 1,91
Synpo2lQ8BWB1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26,91■■□□□ 1,9
Synpo2lQ8BWB1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,88■■□□□ 1,89
Synpo2lQ8BWB1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26,87■■□□□ 1,89
Synpo2lQ8BWB1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26,81■■□□□ 1,88
Synpo2lQ8BWB1 Gm10524-201ENSMUST00000181931 1893 ntBASIC26,76■■□□□ 1,87
Synpo2lQ8BWB1 Gm27325-201ENSMUST00000175467 74 ntBASIC26,74■■□□□ 1,87
Synpo2lQ8BWB1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
Synpo2lQ8BWB1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26,65■■□□□ 1,86
Synpo2lQ8BWB1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26,63■■□□□ 1,85
Synpo2lQ8BWB1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26,62■■□□□ 1,85
Synpo2lQ8BWB1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26,59■■□□□ 1,85
Synpo2lQ8BWB1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,56■■□□□ 1,84
Synpo2lQ8BWB1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26,53■■□□□ 1,84
Synpo2lQ8BWB1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26,53■■□□□ 1,84
Synpo2lQ8BWB1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26,5■■□□□ 1,83
Synpo2lQ8BWB1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
Synpo2lQ8BWB1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26,41■■□□□ 1,82
Synpo2lQ8BWB1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26,36■■□□□ 1,81
Synpo2lQ8BWB1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26,35■■□□□ 1,81
Synpo2lQ8BWB1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26,34■■□□□ 1,81
Synpo2lQ8BWB1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Synpo2lQ8BWB1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26,32■■□□□ 1,8
Synpo2lQ8BWB1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26,32■■□□□ 1,8
Synpo2lQ8BWB1 Gm42596-201ENSMUST00000196305 1958 ntBASIC26,31■■□□□ 1,8
Synpo2lQ8BWB1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26,29■■□□□ 1,8
Synpo2lQ8BWB1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26,27■■□□□ 1,8
Synpo2lQ8BWB1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26,24■■□□□ 1,79
Synpo2lQ8BWB1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26,23■■□□□ 1,79
Synpo2lQ8BWB1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26,18■■□□□ 1,78
Synpo2lQ8BWB1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26,14■■□□□ 1,78
Synpo2lQ8BWB1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26,09■■□□□ 1,77
Synpo2lQ8BWB1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26,05■■□□□ 1,76
Synpo2lQ8BWB1 Rab21-202ENSMUST00000218831 843 ntBASIC26,02■■□□□ 1,76
Synpo2lQ8BWB1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26,01■■□□□ 1,75
Synpo2lQ8BWB1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25,99■■□□□ 1,75
Synpo2lQ8BWB1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Synpo2lQ8BWB1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25,89■■□□□ 1,74
Synpo2lQ8BWB1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25,84■■□□□ 1,73
Synpo2lQ8BWB1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25,82■■□□□ 1,72
Synpo2lQ8BWB1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Synpo2lQ8BWB1 Gm25262-201ENSMUST00000174934 133 ntBASIC25,79■■□□□ 1,72
Synpo2lQ8BWB1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25,78■■□□□ 1,72
Synpo2lQ8BWB1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25,75■■□□□ 1,71
Synpo2lQ8BWB1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25,75■■□□□ 1,71
Synpo2lQ8BWB1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25,74■■□□□ 1,71
Synpo2lQ8BWB1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,73■■□□□ 1,71
Synpo2lQ8BWB1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Synpo2lQ8BWB1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25,7■■□□□ 1,71
Synpo2lQ8BWB1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Synpo2lQ8BWB1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25,66■■□□□ 1,7
Retrieved 100 of 76,532 protein–RNA pairs in 10,3 ms