RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 ICAM5Q9UMF0 924 aa14.32□□□□□ -0.12
SPIN3-233ENST00000640039 ZNF337Q9Y3M9 751 aa14.32□□□□□ -0.12
SPIN3-233ENST00000640039 AP4B1Q9Y6B7 739 aa14.32□□□□□ -0.12
SPIN3-233ENST00000640039 CAPN7Q9Y6W3 813 aa14.32□□□□□ -0.12
SPIN3-233ENST00000640039 CACNA1DQ01668 2161 aa14.32□□□□□ -0.12
SPIN3-233ENST00000640039 MED12Q93074 2177 aa14.32□□□□□ -0.12
SPIN3-233ENST00000640039 ARHGAP21Q5T5U3 1957 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 MYO9AB2RTY4 2548 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 C7orf72A4D263 438 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 AGAP5A6NIR3 686 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 SHISA8B8ZZ34 492 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 SEC14L5O43304 696 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 OIP5O43482 229 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 CCDC22O60826 627 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 CLDN14O95500 239 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 CLDN1O95832 211 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 DBIP07108 87 aaKnown RBP14.31□□□□□ -0.12
SPIN3-233ENST00000640039 TFPTP0C1Z6 253 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 ME2P23368 584 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 CHRNB4P30926 498 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 SEC24CP53992 1094 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 CLDN18P56856 261 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 GNGT1P63211 74 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 KCNJ10P78508 379 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 ART3Q13508 389 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 GCNT6Q5T4J0 391 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 NSUN5P2Q63ZY6 315 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 DLEU7Q6UYE1 221 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 CPLX4Q7Z7G2 160 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 HMGN2P46Q86SG4 172 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 CMIPQ8IY22 773 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 SLC38A5Q8WUX1 472 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 ZG16BQ96DA0 208 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 TMEM19Q96HH6 336 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 RNF145Q96MT1 663 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 CGREF1Q99674 301 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 ELAC2Q9BQ52 826 aaKnown RBP14.31□□□□□ -0.12
SPIN3-233ENST00000640039 TUBA1CQ9BQE3 449 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 RUBCNLQ9H714 662 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 CALHM2Q9HA72 323 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 A4GALTQ9NPC4 353 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 RNF6Q9Y252 685 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 GPC6Q9Y625 555 aaPredicted RBP14.31□□□□□ -0.12
SPIN3-233ENST00000640039 CENPEQ02224 2701 aa14.31□□□□□ -0.12
SPIN3-233ENST00000640039 TRBV5-3A0A0A0MS03 114 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 GMNCA6NCL1 334 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 CD8B2A6NJW9 211 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 HSPB2A8KAH6 182 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 BBIP1A8MTZ0 92 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 PRSS44E7EML9 344 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 SLC22A2O15244 555 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 IL2RAP01589 272 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 LINGO3P0C6S8 592 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 BMP2P12643 396 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 PGCP20142 388 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 GYS2P54840 703 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 RPS3AP61247 264 aaKnown RBP14.3□□□□□ -0.12
SPIN3-233ENST00000640039 FOXF1Q12946 379 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 SKP2Q13309 424 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 HSPB2Q16082 182 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 TMEM44Q2T9K0 475 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 RIPPLY2Q5TAB7 128 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 RETREG3Q86VR2 466 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 CCDC71Q8IV32 467 aaPredicted RBP14.3□□□□□ -0.12
SPIN3-233ENST00000640039 GPR119Q8TDV5 335 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 ARSGQ96EG1 525 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 TREX2Q9BQ50 279 aaPredicted RBP14.3□□□□□ -0.12
SPIN3-233ENST00000640039 CPPED1Q9BRF8 314 aaPredicted RBP14.3□□□□□ -0.12
SPIN3-233ENST00000640039 THUMPD3Q9BV44 507 aaKnown RBP14.3□□□□□ -0.12
SPIN3-233ENST00000640039 KLF2Q9Y5W3 355 aaPredicted RBP14.3□□□□□ -0.12
SPIN3-233ENST00000640039 GMEB1Q9Y692 573 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 PCNX1Q96RV3 2341 aa14.3□□□□□ -0.12
SPIN3-233ENST00000640039 A0A0G2JNJ9 132 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 A0A0G2JPF8 293 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 CLCA1A8K7I4 914 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 HNRNPCL2B2RXH8 293 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 HNRNPCL3B7ZW38 293 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 HNRNPCL1O60812 293 aaKnown RBP14.29□□□□□ -0.12
SPIN3-233ENST00000640039 NUDT7P0C024 238 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 HNRNPCL4P0DMR1 293 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 ARAFP10398 606 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 NID1P14543 1247 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 GPX2P18283 190 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 RPS4Y1P22090 263 aaKnown RBP14.29□□□□□ -0.12
SPIN3-233ENST00000640039 ELK4P28324 431 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 ADH6P28332 368 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 TIMP3P35625 211 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 PGM1P36871 562 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 RAC1P63000 192 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 CYLC2Q14093 348 aaPredicted RBP14.29□□□□□ -0.12
SPIN3-233ENST00000640039 LARS2Q15031 903 aaKnown RBP14.29□□□□□ -0.12
SPIN3-233ENST00000640039 QPRTQ15274 297 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 TRMT5Q32P41 509 aaKnown RBP14.29□□□□□ -0.12
SPIN3-233ENST00000640039 LIN52Q52LA3 116 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 RUNDC3AQ59EK9 446 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 COQ5Q5HYK3 327 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 RPS26P11Q5JNZ5 115 aaPredicted RBP14.29□□□□□ -0.12
SPIN3-233ENST00000640039 PRAMEF8Q5VWM4 474 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 PRAMEF7Q5VXH5 474 aa14.29□□□□□ -0.12
SPIN3-233ENST00000640039 P4HA3Q7Z4N8 544 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms