RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ZNF232Q9UNY5 417 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 L3MBTL1Q9Y468 752 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 GMEB1Q9Y692 573 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 A0A0G2JNJ9 132 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 MBD3L4A6NDZ8 208 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 MBD3L3A6NE82 208 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 AGAP5A6NIR3 686 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 MBD3L5A6NJ08 208 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 CLCA1A8K7I4 914 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 C5orf58C9J3I9 102 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 BCHEP06276 602 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 CHRM4P08173 479 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 LINGO3P0C6S8 592 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 UBTFL6P0CB48 400 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 BMP2P12643 396 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 HOXB9P17482 250 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 PGCP20142 388 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 CEACAM8P31997 349 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 SLC6A8P48029 635 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 RNF144AP50876 292 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 EEF1A1P68104 462 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 SF3A3Q12874 501 aaKnown RBP eCLIP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 MAPK14Q16539 360 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 EEF1A1P5Q5VTE0 462 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 SP5Q6BEB4 398 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 MBD3L2Q8NHZ7 208 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 SLC38A5Q8WUX1 472 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 WDR60Q8WVS4 1066 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 TMEM234Q8WY98 164 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 SMPDL3BQ92485 455 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 ZG16BQ96DA0 208 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 MRGPRX4Q96LA9 322 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 RNF145Q96MT1 663 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 ZFP3Q96NJ6 502 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 THUMPD3Q9BV44 507 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 ARMC7Q9H6L4 198 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 RUBCNLQ9H714 662 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 A4GALTQ9NPC4 353 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 EXOSC3Q9NQT5 275 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 SLC25A37Q9NYZ2 338 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 VAPAQ9P0L0 249 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 SLAMF8Q9P0V8 285 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 Q9UFV3 132 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 PRDM4Q9UKN5 801 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 NCKAP5O14513 1909 aa15.6■□□□□ 0.09
SHKBP1-212ENST00000596163 GJE1A6NN92 205 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 DVL2O14641 736 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 SLC22A2O15244 555 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 SEC14L5O43304 696 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 OIP5O43482 229 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 CCDC22O60826 627 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 ELK4P28324 431 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 PGM1P36871 562 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 SKP2Q13309 424 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 NFYCQ13952 458 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 LARS2Q15031 903 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 SGCBQ16585 318 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 NDUFAF6Q330K2 333 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 SLC25A35Q3KQZ1 300 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 SEM1Q6ZVN7 128 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 P4HA3Q7Z4N8 544 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 ADGRE4PQ86SQ3 457 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 DHDDSQ86SQ9 333 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 GRAMD2AQ8IUY3 354 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 TNIP2Q8NFZ5 429 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 FBXO27Q8NI29 283 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 ST8SIA1Q92185 356 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 LRRC46Q96FV0 321 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 TMEM19Q96HH6 336 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 NSRP1Q9H0G5 558 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 SAR1AQ9NR31 198 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 ZNF629Q9UEG4 869 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 IFT52Q9Y366 437 aa15.59■□□□□ 0.09
SHKBP1-212ENST00000596163 TRBV5-3A0A0A0MS03 114 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 CENPVL1A0A0U1RR11 272 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 SHISA8B8ZZ34 492 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 DNAJA2O60884 412 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 TOXO94900 526 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 UQCRBP14927 111 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 PRKCAP17252 672 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 GPX2P18283 190 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 CTSSP25774 331 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 PSMA4P25789 261 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 OPRM1P35372 400 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 KLF10Q13118 480 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 QPRTQ15274 297 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 MMEL1Q495T6 779 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 LIN52Q52LA3 116 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 RUNDC3AQ59EK9 446 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 SLC25A53Q5H9E4 307 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 COQ5Q5HYK3 327 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 GCNT6Q5T4J0 391 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 OR2A2Q6IF42 318 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 DLEU7Q6UYE1 221 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 MSRB3Q8IXL7 192 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 ZNF440Q8IYI8 595 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 OR52P1PQ8NH57 321 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 ZNF563Q8TA94 476 aa15.58■□□□□ 0.08
SHKBP1-212ENST00000596163 BBS10Q8TAM1 723 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms