RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TP53INP1Q96A56 240 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 MPP4Q96JB8 637 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 Q96MT0 163 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 ZPBPQ9BS86 351 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 TEX12Q9BXU0 123 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 ITPAQ9BY32 194 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 OR8D2Q9GZM6 311 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 WDR54Q9H977 334 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 SLC22A11Q9NSA0 550 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 FBXO34Q9NWN3 711 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 IMPAD1Q9NX62 359 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 REV1Q9UBZ9 1251 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 C19orf25Q9UFG5 118 aaPredicted RBP9.58□□□□□ -0.88
LIG3-203ENST00000585370 KCNE5Q9UJ90 142 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 PPIEQ9UNP9 301 aaKnown RBP9.58□□□□□ -0.88
LIG3-203ENST00000585370 PCDHGA6Q9Y5G7 932 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 SNX5Q9Y5X3 404 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 MYO18BQ8IUG5 2567 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 SPTBP11277 2137 aa9.58□□□□□ -0.88
LIG3-203ENST00000585370 SPTA1P02549 2419 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 CCDC187A0A096LP49 1063 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 SH3D21A4FU49 640 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 OR2W5A6NFC9 320 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 SERINC4A6NH21 518 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 CPSF4LA6NMK7 179 aaKnown RBP9.57□□□□□ -0.88
LIG3-203ENST00000585370 A8MUA0 341 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 K7ENP7 123 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 MEN1O00255 615 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 SLC1A7O00341 560 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 PEX12O00623 359 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 TPST2O60704 377 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 ALOX12BO75342 701 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 IGKV1D-16P01601 117 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 NGFRP08138 427 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 POU2F1P14859 743 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 HPGDP15428 266 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 TBXA2RP21731 343 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 MMP11P24347 488 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 CHMP24386 653 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 RBM34P42696 430 aaKnown RBP9.57□□□□□ -0.88
LIG3-203ENST00000585370 GSSP48637 474 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 TUBA3CQ13748 450 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 OR1Q1Q15612 314 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 CTU2Q2VPK5 515 aaKnown RBP9.57□□□□□ -0.88
LIG3-203ENST00000585370 ZBED5Q49AG3 693 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 KLHL26Q53HC5 615 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 PDZK1Q5T2W1 519 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 SLX4IPQ5VYV7 408 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 INO80CQ6PI98 192 aaPredicted RBP9.57□□□□□ -0.88
LIG3-203ENST00000585370 RASSF6Q6ZTQ3 369 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 MBOAT2Q6ZWT7 520 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 ZER1Q7Z7L7 766 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 CLDN22Q8N7P3 220 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 BMPERQ8N8U9 685 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 OR4N2Q8NGD1 307 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 LIN37Q96GY3 246 aaPredicted RBP9.57□□□□□ -0.88
LIG3-203ENST00000585370 CMKLR1Q99788 373 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 NUDT9Q9BW91 350 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 PRRG3Q9BZD7 231 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 STRADBQ9C0K7 418 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 DUSP21Q9H596 190 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 OCIAD1Q9NX40 245 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 SELENONQ9NZV5 590 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 GPN3Q9UHW5 284 aaPredicted RBP9.57□□□□□ -0.88
LIG3-203ENST00000585370 TMEM5Q9Y2B1 443 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 PCDHGB1Q9Y5G3 927 aa9.57□□□□□ -0.88
LIG3-203ENST00000585370 TLN1Q9Y490 2541 aaKnown RBP9.57□□□□□ -0.88
LIG3-203ENST00000585370 SCN2AQ99250 2005 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 A0A1W2PQD3 144 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 IDSB3KWA1 339 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 PLD2O14939 933 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 LINGO3P0C6S8 592 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 FPR3P25089 353 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 EPHA2P29317 976 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 SLC5A2P31639 672 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 GIPRP48546 466 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 PNLIPRP2P54317 469 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 SH3BGRP55822 239 aaPredicted RBP9.56□□□□□ -0.88
LIG3-203ENST00000585370 NRG3P56975 720 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 RAB15P59190 212 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 SNRPGP62308 76 aaKnown RBP9.56□□□□□ -0.88
LIG3-203ENST00000585370 NADK2Q4G0N4 442 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 SLC25A30Q5SVS4 291 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 RPL13AP3Q6NVV1 102 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 CASP12Q6UXS9 341 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 CCDC81Q6ZN84 652 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 RAB11FIP2Q7L804 512 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 GPR141Q7Z602 305 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 ANKRD37Q7Z713 158 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 HMGN2P46Q86SG4 172 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 LAPTM4BQ86VI4 370 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 ENTHD1Q8IYW4 607 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 ALDH16A1Q8IZ83 802 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 SLC34A3Q8N130 599 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 SLC43A2Q8N370 569 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 SVOPQ8N4V2 548 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 SLC38A9Q8NBW4 561 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 BPIFB6Q8NFQ5 453 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 OR5L2Q8NGL0 311 aa9.56□□□□□ -0.88
LIG3-203ENST00000585370 OR8K3Q8NH51 312 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms