RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 L3MBTL1Q9Y468 752 aa9.65□□□□□ -0.86
LINC00239-201ENST00000556973 GPC6Q9Y625 555 aaPredicted RBP9.65□□□□□ -0.86
LINC00239-201ENST00000556973 RP1L1Q8IWN7 2480 aaPredicted RBP9.65□□□□□ -0.86
LINC00239-201ENST00000556973 TRBV5-3A0A0A0MS03 114 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 CENPVL1A0A0U1RR11 272 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 MBD3L4A6NDZ8 208 aaPredicted RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 MBD3L3A6NE82 208 aaPredicted RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 MBD3L5A6NJ08 208 aaPredicted RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 CLCA1A8K7I4 914 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 SHISA8B8ZZ34 492 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 OIP5O43482 229 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 CYP7B1O75881 506 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 RCBTB2O95199 551 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 BCHEP06276 602 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 UBTFL6P0CB48 400 aaPredicted RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 GPX2P18283 190 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 ME2P23368 584 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 PSMA4P25789 261 aaKnown RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 RNF144AP50876 292 aaPredicted RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 SUCLG1P53597 346 aaKnown RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 RPS3AP61247 264 aaKnown RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 EEF1A1P68104 462 aaKnown RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 SF3A3Q12874 501 aaKnown RBP eCLIP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 KLF10Q13118 480 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 SKP2Q13309 424 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 MAPK11Q15759 364 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 RUNDC3AQ59EK9 446 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 SLC25A53Q5H9E4 307 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 EEF1A1P5Q5VTE0 462 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 PRAMEF8Q5VWM4 474 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 PRAMEF7Q5VXH5 474 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 CCDC71Q8IV32 467 aaPredicted RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 MSRB3Q8IXL7 192 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 UBQLNLQ8IYU4 475 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 LILRA2Q8N149 483 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 DPP10Q8N608 796 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 TMCO5AQ8N6Q1 288 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 TNIP2Q8NFZ5 429 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 MBD3L2Q8NHZ7 208 aaPredicted RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 POC1BQ8TC44 478 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 TMEM234Q8WY98 164 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 WNT2BQ93097 391 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 RNF145Q96MT1 663 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 KLHDC3Q9BQ90 382 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 THUMPD3Q9BV44 507 aaKnown RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 RUBCNLQ9H714 662 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 A4GALTQ9NPC4 353 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 KCNJ16Q9NPI9 418 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 EXOSC3Q9NQT5 275 aaKnown RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 SAR1AQ9NR31 198 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 PAQR5Q9NXK6 330 aaPredicted RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF629Q9UEG4 869 aaPredicted RBP9.64□□□□□ -0.87
LINC00239-201ENST00000556973 PRDM4Q9UKN5 801 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 ZNF232Q9UNY5 417 aa9.64□□□□□ -0.87
LINC00239-201ENST00000556973 HCFC1P51610 2035 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 DSPPQ9NZW4 1301 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 KIAA1549Q9HCM3 1950 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 KDM4EB2RXH2 506 aaPredicted RBP9.63□□□□□ -0.87
LINC00239-201ENST00000556973 SLC22A2O15244 555 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 CCDC22O60826 627 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 NPPAP01160 153 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 PRKCAP17252 672 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 PGCP20142 388 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 RPS4Y1P22090 263 aaKnown RBP9.63□□□□□ -0.87
LINC00239-201ENST00000556973 COL8A1P27658 744 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 ELK4P28324 431 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 SLC6A8P48029 635 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 CLDN15P56746 228 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 CLDN20P56880 219 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 NFYCQ13952 458 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 QPRTQ15274 297 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 MAPRE2Q15555 327 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 TOMM34Q15785 309 aaPredicted RBP9.63□□□□□ -0.87
LINC00239-201ENST00000556973 ZSWIM7Q19AV6 140 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 NDUFAF6Q330K2 333 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 ESPNLQ6ZVH7 1005 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 DHDDSQ86SQ9 333 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 GGNQ86UU5 652 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 RETREG3Q86VR2 466 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 LIX1LQ8IVB5 337 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 FAM71CQ8NEG0 241 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 OR52P1PQ8NH57 321 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 FBXO27Q8NI29 283 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 WDR60Q8WVS4 1066 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 C10orf82Q8WW14 230 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 ST8SIA1Q92185 356 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 SMPDL3BQ92485 455 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 TMEM19Q96HH6 336 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 MRGPRX4Q96LA9 322 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 ZFP3Q96NJ6 502 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 ANKRD27Q96NW4 1050 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 NPAS1Q99742 590 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 TREX2Q9BQ50 279 aaPredicted RBP9.63□□□□□ -0.87
LINC00239-201ENST00000556973 QRSL1Q9H0R6 528 aaKnown RBP9.63□□□□□ -0.87
LINC00239-201ENST00000556973 ARMC7Q9H6L4 198 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 CACYBPQ9HB71 228 aaKnown RBP9.63□□□□□ -0.87
LINC00239-201ENST00000556973 BCL2L10Q9HD36 194 aa9.63□□□□□ -0.87
LINC00239-201ENST00000556973 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.63□□□□□ -0.87
LINC00239-201ENST00000556973 IFT52Q9Y366 437 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms