RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 CALML5Q9NZT1 146 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 ZNF629Q9UEG4 869 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 PCDHB14Q9Y5E9 798 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 GPC6Q9Y625 555 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 GMEB1Q9Y692 573 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 PHF3Q92576 2039 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 FREM3P0C091 2139 aa13.91□□□□□ -0.18
PRPF40B-211ENST00000551063 SHISA8B8ZZ34 492 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 ETV2O00321 342 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 DVL2O14641 736 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 SEC14L5O43304 696 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 DNAJA2O60884 412 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 NUDT14O95848 222 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 IL18BPO95998 194 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 CHRM4P08173 479 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 VIMP08670 466 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 NR2F1P10589 423 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 CRATP43155 626 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 RNF144AP50876 292 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 SUCLG1P53597 346 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 CLDN15P56746 228 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 DSTNP60981 165 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 RAC1P63000 192 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 TFF3Q07654 80 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 FOXF1Q12946 379 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 CBFBQ13951 182 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 MAPK14Q16539 360 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 SYPL1Q16563 259 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 CHMP1BQ7LBR1 199 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 GRAMD2AQ8IUY3 354 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 MCEMP1Q8IX19 187 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 CMIPQ8IY22 773 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 TMCO5AQ8N6Q1 288 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 C9orf106Q8NAJ2 232 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 ACBD4Q8NC06 268 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 POC1BQ8TC44 478 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 TSPEARQ8WU66 669 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 RNF145Q96MT1 663 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 KLHDC3Q9BQ90 382 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 UCK2Q9BZX2 261 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 EXOSC3Q9NQT5 275 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 ZNF175Q9Y473 711 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 CELSR2Q9HCU4 2923 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 CACNA1CQ13936 2221 aa13.9□□□□□ -0.18
PRPF40B-211ENST00000551063 TMEM247A6NEH6 219 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 AGAP5A6NIR3 686 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 C19orf84I3L1E1 186 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 CLIC1O00299 241 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 RCBTB2O95199 551 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 BMP2P12643 396 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 ETFAP13804 333 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 PRKCAP17252 672 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 RPS4Y1P22090 263 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 PPIBP23284 216 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 ME2P23368 584 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 PGM1P36871 562 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 MDH1P40925 334 aaKnown RBP13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 CCR4P51679 360 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 ZNF136P52737 540 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 ARFIP2P53365 341 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 CRISP3P54108 245 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 CLDN20P56880 219 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 GNA13Q14344 377 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 RGNQ15493 299 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 NDUFAF6Q330K2 333 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 SLC25A53Q5H9E4 307 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 PAGE3Q5JUK9 113 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 CGB2Q6NT52 195 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 GGNQ86UU5 652 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 LIX1LQ8IVB5 337 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 MSRB3Q8IXL7 192 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 GPR119Q8TDV5 335 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 ST8SIA1Q92185 356 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 SMPDL3BQ92485 455 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 MRGPRX4Q96LA9 322 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 SPOCK3Q9BQ16 436 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 SFXN3Q9BWM7 321 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 ENKD1Q9H0I2 346 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 MTHFD2LQ9H903 347 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 PAQR5Q9NXK6 330 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 SLC25A37Q9NYZ2 338 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 LEF1Q9UJU2 399 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 DSPPQ9NZW4 1301 aa13.89□□□□□ -0.19
PRPF40B-211ENST00000551063 TRBV5-3A0A0A0MS03 114 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 NKX2-6A6NCS4 301 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 SLC22A20A6NK97 555 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 H0YC42 278 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 NTN1O95631 604 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 TFPTP0C1Z6 253 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 UBTFL6P0CB48 400 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 TMIGD3P0DMS9 266 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 FCGR2AP12318 317 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 PRF1P14222 555 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 COX6B1P14854 86 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 IGFBP2P18065 325 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 CTSSP25774 331 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 OPRM1P35372 400 aa13.88□□□□□ -0.19
PRPF40B-211ENST00000551063 TPD52P55327 224 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms