RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 SLC39A3Q9BRY0 314 aa12.42□□□□□ -0.42
TROAP-213ENST00000550709 LAT2Q9GZY6 243 aa12.42□□□□□ -0.42
TROAP-213ENST00000550709 TMEM185BQ9H7F4 350 aa12.42□□□□□ -0.42
TROAP-213ENST00000550709 A4GALTQ9NPC4 353 aa12.42□□□□□ -0.42
TROAP-213ENST00000550709 CALML5Q9NZT1 146 aa12.42□□□□□ -0.42
TROAP-213ENST00000550709 SPTAN1Q13813 2472 aaKnown RBP12.42□□□□□ -0.42
TROAP-213ENST00000550709 EXPH5Q8NEV8 1989 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 DOPEY2Q9Y3R5 2298 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 SNX3O60493 162 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 HOXD4P09016 255 aaPredicted RBP12.41□□□□□ -0.42
TROAP-213ENST00000550709 LINGO3P0C6S8 592 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 PEPDP12955 493 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 CPN1P15169 458 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 GPX2P18283 190 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 PTGER4P35408 488 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 SUMO3P55854 103 aaPredicted RBP12.41□□□□□ -0.42
TROAP-213ENST00000550709 CLDN18P56856 261 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 CLDN20P56880 219 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 FOXF1Q12946 379 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 QPRTQ15274 297 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 CDSNQ15517 529 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 TMEM44Q2T9K0 475 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 AP1ARQ63HQ0 302 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 VRK2Q86Y07 508 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 GTPBP8Q8N3Z3 284 aaPredicted RBP12.41□□□□□ -0.42
TROAP-213ENST00000550709 ZNF808Q8N4W9 903 aaPredicted RBP12.41□□□□□ -0.42
TROAP-213ENST00000550709 ATP6V1C2Q8NEY4 427 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 OR52P1PQ8NH57 321 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 POC1BQ8TC44 478 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 PHF10Q8WUB8 498 aaKnown RBP12.41□□□□□ -0.42
TROAP-213ENST00000550709 WDR60Q8WVS4 1066 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 ZBTB8AQ96BR9 441 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 PIF1Q9H611 641 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 CACYBPQ9HB71 228 aaKnown RBP12.41□□□□□ -0.42
TROAP-213ENST00000550709 RLIMQ9NVW2 624 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 CORO2BQ9UQ03 480 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 SLC35A3Q9Y2D2 325 aa12.41□□□□□ -0.42
TROAP-213ENST00000550709 GTF3C1Q12789 2109 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 A0A0G2JPF8 293 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 HNRNPCL2B2RXH8 293 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 HNRNPCL3B7ZW38 293 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 HNRNPCL1O60812 293 aaKnown RBP12.4□□□□□ -0.42
TROAP-213ENST00000550709 CLDN1O95832 211 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 DBIP07108 87 aaKnown RBP12.4□□□□□ -0.42
TROAP-213ENST00000550709 HNRNPCL4P0DMR1 293 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 ARAFP10398 606 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 BMP2P12643 396 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 ZNF708P17019 499 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 IL11P20809 199 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 RPS4Y1P22090 263 aaKnown RBP12.4□□□□□ -0.42
TROAP-213ENST00000550709 ADSLP30566 484 aaPredicted RBP12.4□□□□□ -0.42
TROAP-213ENST00000550709 PGM1P36871 562 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 ADH7P40394 386 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 SUCLG1P53597 346 aaKnown RBP12.4□□□□□ -0.42
TROAP-213ENST00000550709 CDK6Q00534 326 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 CBFBQ13951 182 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 CYP51A1Q16850 503 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 TRMT5Q32P41 509 aaKnown RBP12.4□□□□□ -0.42
TROAP-213ENST00000550709 MRPL2Q5T653 305 aaKnown RBP12.4□□□□□ -0.42
TROAP-213ENST00000550709 POMZP3Q6PJE2 187 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 XKRXQ6PP77 449 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 SEM1Q6ZVN7 128 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 CHMP1BQ7LBR1 199 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 MEIOBQ8N635 442 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 FBXO27Q8NI29 283 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 LRRC58Q96CX6 371 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 RCN3Q96D15 328 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 COQ3Q9NZJ6 369 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 RNF6Q9Y252 685 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 DOPEY1Q5JWR5 2465 aa12.4□□□□□ -0.42
TROAP-213ENST00000550709 FLNBO75369 2602 aaKnown RBP12.4□□□□□ -0.43
TROAP-213ENST00000550709 HECTD1Q9ULT8 2610 aa12.4□□□□□ -0.43
TROAP-213ENST00000550709 NCKAP5O14513 1909 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 A0A0G2JNJ9 132 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 CLCA1A8K7I4 914 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 BBIP1A8MTZ0 92 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 LINC01387J3KSC0 135 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 SLC22A2O15244 555 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 PGM3O95394 542 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 EPPINO95925 133 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 COX4I1P13073 169 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 NID1P14543 1247 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 ZNF17P17021 662 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 PRKCAP17252 672 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 PGCP20142 388 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 ME2P23368 584 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 SLC6A2P23975 617 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 AQP1P29972 269 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 SFTPDP35247 375 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 EIF1P41567 113 aaKnown RBP12.39□□□□□ -0.43
TROAP-213ENST00000550709 CLDN15P56746 228 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 SESN3P58005 492 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 PLAURQ03405 335 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 SCARB2Q14108 478 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 LARS2Q15031 903 aaKnown RBP12.39□□□□□ -0.43
TROAP-213ENST00000550709 SF3B4Q15427 424 aaKnown RBP eCLIP12.39□□□□□ -0.43
TROAP-213ENST00000550709 ADRM1Q16186 407 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 BCL2A1Q16548 175 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 LIN52Q52LA3 116 aa12.39□□□□□ -0.43
TROAP-213ENST00000550709 RABL3Q5HYI8 236 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms