RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 DYRK3O43781 588 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 SAGP10523 405 aaPredicted RBP14.36□□□□□ -0.11
BRF1-212ENST00000547562 RFX2P48378 723 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 RFX3P48380 749 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 CTBP2P56545 445 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 C1orf61Q13536 156 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 PDZK1Q5T2W1 519 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 THSD4Q6ZMP0 1018 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 SLC44A3Q8N4M1 653 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 DNAJA4Q8WW22 397 aaPredicted RBP14.36□□□□□ -0.11
BRF1-212ENST00000547562 CNOT9Q92600 299 aaKnown RBP14.36□□□□□ -0.11
BRF1-212ENST00000547562 TOE1Q96GM8 510 aaKnown RBP14.36□□□□□ -0.11
BRF1-212ENST00000547562 GAS2L1Q99501 681 aaPredicted RBP14.36□□□□□ -0.11
BRF1-212ENST00000547562 HCAR1Q9BXC0 346 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 EVA1AQ9H8M9 152 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 MEPEQ9NQ76 525 aaPredicted RBP14.36□□□□□ -0.11
BRF1-212ENST00000547562 CMC2Q9NRP2 79 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 A0A0B4J2E0 115 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 A0A1B0GX12 115 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 ZC3H12DA2A288 527 aaKnown RBP14.36□□□□□ -0.11
BRF1-212ENST00000547562 FAM86C2PA6NEL3 165 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 SHISA7A6NL88 538 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 C12orf71A8MTZ7 269 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 SOX30O94993 753 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 IGLV3-19P01714 112 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 S1PR1P21453 382 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 PSG6Q00889 435 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 BDH1Q02338 343 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 SCN1BQ07699 218 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 C1QTNF12Q5T7M4 302 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 AGAP6Q5VW22 663 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 ZC3H14Q6PJT7 736 aaKnown RBP14.36□□□□□ -0.11
BRF1-212ENST00000547562 MARCH9Q86YJ5 346 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 GDPD1Q8N9F7 314 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 NEIL3Q8TAT5 605 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 GRHL3Q8TE85 626 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 KISS1RQ969F8 398 aaPredicted RBP14.36□□□□□ -0.11
BRF1-212ENST00000547562 ABHD8Q96I13 439 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 AGAP4Q96P64 663 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 LMF2Q9BU23 707 aaKnown RBP14.36□□□□□ -0.11
BRF1-212ENST00000547562 IFT27Q9BW83 186 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 ISG20L2Q9H9L3 353 aaKnown RBP14.36□□□□□ -0.11
BRF1-212ENST00000547562 GPR27Q9NS67 375 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 CYP8B1Q9UNU6 501 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 POLHQ9Y253 713 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 TMEM131Q92545 1883 aa14.36□□□□□ -0.11
BRF1-212ENST00000547562 CHP2O43745 196 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 TMCC2O75069 709 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 OR2B6P58173 313 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 FOXK2Q01167 660 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 ZNF614Q8N883 585 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 C19orf47Q8N9M1 422 aaKnown RBP14.35□□□□□ -0.11
BRF1-212ENST00000547562 ZDHHC1Q8WTX9 485 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 KIAA1143Q96AT1 154 aaPredicted RBP14.35□□□□□ -0.11
BRF1-212ENST00000547562 NEDD4LQ96PU5 975 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 ALG8Q9BVK2 526 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 RBCK1Q9BYM8 510 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 FOLH1BQ9HBA9 442 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 GRIP1Q9Y3R0 1128 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 POLR1CO15160 346 aaPredicted RBP14.35□□□□□ -0.11
BRF1-212ENST00000547562 RFPL3O75679 317 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 GALP22466 123 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 PPP3R1P63098 170 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 GPR50Q13585 617 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 INSL4Q14641 139 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 GRAMD2AQ8IUY3 354 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 TMEM99Q8N816 258 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 SLC37A3Q8NCC5 494 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 PTP4A1Q93096 173 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 TIMP4Q99727 224 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 NPAP1Q9NZP6 1156 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 FLRT3Q9NZU0 649 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 COMMD3Q9UBI1 195 aa14.35□□□□□ -0.11
BRF1-212ENST00000547562 TRAV27A0A087WT01 109 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 A0A1B0GWA3 101 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 SHISA3A0PJX4 238 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 CD8B2A6NJW9 211 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 PRR23D1E9PI22 279 aaPredicted RBP14.34□□□□□ -0.11
BRF1-212ENST00000547562 HCN1O60741 890 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 PTP4A3O75365 173 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 CSF3P09919 207 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 PRR23D2P0DMB1 279 aaPredicted RBP14.34□□□□□ -0.11
BRF1-212ENST00000547562 CD8BP10966 210 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 EMDP50402 254 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 ASAH1Q13510 395 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 ZNHIT3Q15649 155 aaPredicted RBP14.34□□□□□ -0.11
BRF1-212ENST00000547562 TAB1Q15750 504 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 KLHL12Q53G59 568 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 NCCRP1Q6ZVX7 275 aaPredicted RBP14.34□□□□□ -0.11
BRF1-212ENST00000547562 MCATQ8IVS2 390 aaKnown RBP14.34□□□□□ -0.11
BRF1-212ENST00000547562 AVL9Q8NBF6 648 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 PTCHD1Q96NR3 888 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 BABAM2Q9NXR7 383 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 A0A0A6YYC8 382 aaPredicted RBP14.34□□□□□ -0.11
BRF1-212ENST00000547562 SLC22A31A6NKX4 558 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 B4DGG1 531 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 C2CD4DB7Z1M9 353 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 I3L1I5 382 aaPredicted RBP14.34□□□□□ -0.11
BRF1-212ENST00000547562 SEC14L5O43304 696 aa14.34□□□□□ -0.11
BRF1-212ENST00000547562 ADAM11O75078 769 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms