RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 DEPPQ9NTK1 212 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 AP4S1Q9Y587 144 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 A0A0G2JMM0 328 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 A0A1W2PPB8 328 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 A0A1W2PRS3 328 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 KIR3DP1A8MWS1 328 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 H3BNX3 289 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 MKRN2OSH3BPM6 223 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 EIF4E2O60573 245 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 SEMA7AO75326 666 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 KRT36O76013 467 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 IFNW1P05000 195 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ENDOUP21128 410 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ACAA2P42765 397 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 MAGEA2P43356 314 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 DNASE1L1P49184 302 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 GPR85P60893 370 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ZDHHC21Q8IVQ6 265 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 C10orf67Q8IYJ2 551 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ABHD17AQ96GS6 310 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 LAT2Q9GZY6 243 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.26■□□□□ 0.356e-7■■■□□ 14.9
TNFRSF1A-213ENST00000540022 S100A14Q9HCY8 104 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 EXOSC3Q9NQT5 275 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 SDHAF3Q9NRP4 125 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ARMC1Q9NVT9 282 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 AP3D1O14617 1153 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 GMFGO60234 142 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 FABP3P05413 133 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 CNR1P21554 472 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 RYKP34925 604 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 CD97P48960 835 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TNFSF10P50591 281 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 SLC25A25Q6KCM7 469 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 DEF8Q6ZN54 512 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TMCO5AQ8N6Q1 288 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 WDSUB1Q8N9V3 476 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 STMN2Q93045 179 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 SLC35B4Q969S0 331 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 KLHL1Q9NR64 748 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 NDUFAF4Q9P032 175 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 PPP4R1LQ9P1A2 415 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ICAM5Q9UMF0 924 aa17.25■□□□□ 0.35
TNFRSF1A-213ENST00000540022 CPAMD8Q8IZJ3 1885 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 IGLV3-32A0A0A0MS00 114 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TIPRLO75663 272 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 DIRAS1O95057 198 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 SNX4O95219 450 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 SP1P08047 785 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 YAP1P46937 504 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 CCR4P51679 360 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ZFP1Q6P2D0 407 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 AAGABQ6PD74 315 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 IGFL3Q6UXB1 125 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ZNF550Q7Z398 422 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 PIWIL3Q7Z3Z3 882 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TSPYL5Q86VY4 417 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ZNF440Q8IYI8 595 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 B4GALNT2Q8NHY0 566 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 PHF10Q8WUB8 498 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ZNF300Q96RE9 604 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 MCHR1Q99705 422 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 EVA1AQ9H8M9 152 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 MED11Q9P086 117 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 NTNG1Q9Y2I2 539 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ENPP4Q9Y6X5 453 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 EXPH5Q8NEV8 1989 aa17.24■□□□□ 0.35
TNFRSF1A-213ENST00000540022 PINLYPA6NC86 204 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 J3KTA2 159 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 GNB5O14775 395 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 NME2P1O60361 137 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TRIM3O75382 744 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 CD46P15529 392 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 NME2P22392 152 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 HTR2AP28223 471 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 P2RX1P51575 399 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 EPS8Q12929 822 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 GALNTL5Q7Z4T8 443 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 PACS2Q86VP3 889 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ZNF524Q96C55 264 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 SCMH1Q96GD3 660 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TMEM41AQ96HV5 264 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 CTPS2Q9NRF8 586 aa17.23■□□□□ 0.35
TNFRSF1A-213ENST00000540022 SNPHO15079 494 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 HOXB6P17509 224 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 MASP1P48740 699 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 KCNAB2Q13303 367 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ZNF766Q5HY98 468 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 RANBP3LQ86VV4 465 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 PLCZ1Q86YW0 608 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 SULF2Q8IWU5 870 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ZADH2Q8N4Q0 377 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 OR2M7Q8NG81 312 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 OR2M3Q8NG83 312 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 OR5W2Q8NH69 310 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TM9SF4Q92544 642 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 JSRP1Q96MG2 331 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 C5orf34Q96MH7 638 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 DSN1Q9H410 356 aa17.22■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TUBA8Q9NY65 449 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms