RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ARHGAP22Q7Z5H3 698 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 RLIMQ9NVW2 624 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 PCDHGA8Q9Y5G5 932 aa14.02□□□□□ -0.17
USP47-207ENST00000527733 GOLGB1Q14789 3259 aaKnown RBP14.01□□□□□ -0.17
USP47-207ENST00000527733 A6NIZ1 184 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 FLRT2O43155 660 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 ACVR1BP36896 505 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 MPLP40238 635 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 SOX2P48431 317 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 RRADP55042 308 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 RAB15P59190 212 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 RAP1BP61224 184 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 RAP1AP62834 184 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 C17orf67Q0P5P2 114 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 OR7A5Q15622 319 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 KLBQ86Z14 1044 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 OR6T1Q8NGN1 323 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 VSTM5A8MXK1 200 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 H3BSH0 61 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 PHYHO14832 338 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 MYF5P13349 255 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 ISOC1Q96CN7 298 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 WDR34Q96EX3 536 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 FER1L6-AS2Q96M78 137 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 LIN28AQ9H9Z2 209 aaKnown RBP14.01□□□□□ -0.17
USP47-207ENST00000527733 BOKQ9UMX3 212 aaPredicted RBP14.01□□□□□ -0.17
USP47-207ENST00000527733 SPAG17Q6Q759 2223 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 IQCMA0A1B0GVH7 501 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 CIB4A0PJX0 185 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 PPM1DO15297 605 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 RLN1P04808 185 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 S100GP29377 79 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 CRABP1P29762 137 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 YBX1P67809 324 aaKnown RBP14.01□□□□□ -0.17
USP47-207ENST00000527733 FAM189A2Q15884 450 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 EXT1Q16394 746 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 LRFN4Q6PJG9 635 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 OLIG3Q7RTU3 272 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 SPRED1Q7Z699 444 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 MEIOBQ8N635 442 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 OR7G2Q8NG99 324 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 GATAD2BQ8WXI9 593 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 INIPQ9NRY2 104 aa14.01□□□□□ -0.17
USP47-207ENST00000527733 MBD1Q9UIS9 605 aaPredicted RBP14.01□□□□□ -0.17
USP47-207ENST00000527733 TAF4O00268 1085 aa14□□□□□ -0.17
USP47-207ENST00000527733 ARHGAP33O14559 1287 aa14□□□□□ -0.17
USP47-207ENST00000527733 CBFA2T3O75081 653 aa14□□□□□ -0.17
USP47-207ENST00000527733 GDF1P27539 372 aa14□□□□□ -0.17
USP47-207ENST00000527733 DAP3P51398 398 aaKnown RBP14□□□□□ -0.17
USP47-207ENST00000527733 CMIPQ8IY22 773 aa14□□□□□ -0.17
USP47-207ENST00000527733 ZNF101Q8IZC7 436 aa14□□□□□ -0.17
USP47-207ENST00000527733 HTRA1Q92743 480 aa14□□□□□ -0.17
USP47-207ENST00000527733 SP140LQ9H930 580 aa14□□□□□ -0.17
USP47-207ENST00000527733 THSD1Q9NS62 852 aa14□□□□□ -0.17
USP47-207ENST00000527733 TRBV2A0A0J9YWF9 115 aa14□□□□□ -0.17
USP47-207ENST00000527733 MRPS14O60783 128 aaKnown RBP14□□□□□ -0.17
USP47-207ENST00000527733 GRPRP30550 384 aa14□□□□□ -0.17
USP47-207ENST00000527733 IDUAP35475 653 aa14□□□□□ -0.17
USP47-207ENST00000527733 RIDAP52758 137 aaKnown RBP14□□□□□ -0.17
USP47-207ENST00000527733 CSNK2A1P68400 391 aaPredicted RBP14□□□□□ -0.17
USP47-207ENST00000527733 TIAL1Q01085 375 aaKnown RBP eCLIP14□□□□□ -0.17
USP47-207ENST00000527733 FBXO42Q6P3S6 717 aa14□□□□□ -0.17
USP47-207ENST00000527733 XKR5Q6UX68 686 aa14□□□□□ -0.17
USP47-207ENST00000527733 C6orf15Q6UXA7 325 aaPredicted RBP14□□□□□ -0.17
USP47-207ENST00000527733 RNF165Q6ZSG1 346 aa14□□□□□ -0.17
USP47-207ENST00000527733 CCDC80Q76M96 950 aa14□□□□□ -0.17
USP47-207ENST00000527733 NEIL3Q8TAT5 605 aa14□□□□□ -0.17
USP47-207ENST00000527733 NRSN2Q9GZP1 204 aa14□□□□□ -0.17
USP47-207ENST00000527733 NDUFAF4Q9P032 175 aa14□□□□□ -0.17
USP47-207ENST00000527733 SPATA2Q9UM82 520 aa14□□□□□ -0.17
USP47-207ENST00000527733 CENPBD1B2RD01 187 aa14□□□□□ -0.17
USP47-207ENST00000527733 HMGN4O00479 90 aa14□□□□□ -0.17
USP47-207ENST00000527733 GNAO1P09471 354 aa14□□□□□ -0.17
USP47-207ENST00000527733 STT3AP46977 705 aa14□□□□□ -0.17
USP47-207ENST00000527733 ERVK-25P63136 954 aa14□□□□□ -0.17
USP47-207ENST00000527733 SLC18B1Q6NT16 456 aa14□□□□□ -0.17
USP47-207ENST00000527733 LINGO2Q7L985 606 aa14□□□□□ -0.17
USP47-207ENST00000527733 CPNE2Q96FN4 548 aaPredicted RBP14□□□□□ -0.17
USP47-207ENST00000527733 CCDC74BQ96LY2 380 aa14□□□□□ -0.17
USP47-207ENST00000527733 SDF2Q99470 211 aa14□□□□□ -0.17
USP47-207ENST00000527733 B3GNT4Q9C0J1 378 aa14□□□□□ -0.17
USP47-207ENST00000527733 BRWD1Q9NSI6 2320 aa14□□□□□ -0.17
USP47-207ENST00000527733 TRAV27A0A087WT01 109 aa14□□□□□ -0.17
USP47-207ENST00000527733 IGHV3-20A0A0C4DH32 117 aa14□□□□□ -0.17
USP47-207ENST00000527733 C12orf71A8MTZ7 269 aa14□□□□□ -0.17
USP47-207ENST00000527733 CA5AP35218 305 aa14□□□□□ -0.17
USP47-207ENST00000527733 RAB14P61106 215 aa14□□□□□ -0.17
USP47-207ENST00000527733 BTG2P78543 158 aa14□□□□□ -0.17
USP47-207ENST00000527733 DUSP7Q16829 419 aa14□□□□□ -0.17
USP47-207ENST00000527733 PGGHGQ32M88 737 aa14□□□□□ -0.17
USP47-207ENST00000527733 FCRLBQ6BAA4 426 aa14□□□□□ -0.17
USP47-207ENST00000527733 MS4A15Q8N5U1 240 aa14□□□□□ -0.17
USP47-207ENST00000527733 CNRIP1Q96F85 164 aaPredicted RBP14□□□□□ -0.17
USP47-207ENST00000527733 EBF1Q9UH73 591 aa14□□□□□ -0.17
USP47-207ENST00000527733 A0A1B0GWA3 101 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 APOC1P02654 83 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 CD46P15529 392 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 EPHA8P29322 1005 aaPredicted RBP13.99□□□□□ -0.17
USP47-207ENST00000527733 CXCR4P61073 352 aa13.99□□□□□ -0.17
USP47-207ENST00000527733 CHAF1BQ13112 559 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms