RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 RAB39AQ14964 217 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 PTGES3Q15185 160 aaKnown RBP17.28■□□□□ 0.36
SMPD1-203ENST00000527275 SMN1Q16637 294 aaKnown RBP17.28■□□□□ 0.36
SMPD1-203ENST00000527275 HLA-DQA1Q5Y7H0 255 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 PLAG1Q6DJT9 500 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 ADAMTS17Q8TE56 1095 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 LCORQ96JN0 433 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-203ENST00000527275 LMF1Q96S06 567 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 NODALQ96S42 347 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 SAP130Q9H0E3 1048 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 FBXL4Q9UKA2 621 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 SNX5Q9Y5X3 404 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 PCSK5Q92824 1860 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 AGAP5A6NIR3 686 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 AK1P00568 194 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 DRD5P21918 477 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 TTKP33981 857 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 IDH2P48735 452 aaKnown RBP17.28■□□□□ 0.36
SMPD1-203ENST00000527275 CRISP1P54107 249 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 UGT2B15P54855 530 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 TAS2R41P59536 307 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 EXT1Q16394 746 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 PGBD2Q6P3X8 592 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 ZNF619Q8N2I2 560 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 LINC00471Q8N535 108 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 ELP5Q8TE02 316 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 APH1BQ8WW43 257 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 NR4A3Q92570 626 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 TUBA1CQ9BQE3 449 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 CBLCQ9ULV8 474 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 COMMD3-BMI1R4GMX3 469 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 CHMP24386 653 aa17.27■□□□□ 0.36
SMPD1-203ENST00000527275 TRHRP34981 398 aaPredicted RBP17.27■□□□□ 0.36
SMPD1-203ENST00000527275 ID4P47928 161 aa17.27■□□□□ 0.36
SMPD1-203ENST00000527275 NR0B1P51843 470 aaKnown RBP17.27■□□□□ 0.36
SMPD1-203ENST00000527275 XAF1Q6GPH4 301 aa17.27■□□□□ 0.36
SMPD1-203ENST00000527275 C16orf47Q6ZP98 133 aaPredicted RBP17.27■□□□□ 0.36
SMPD1-203ENST00000527275 DEPDC4Q8N2C3 294 aa17.27■□□□□ 0.36
SMPD1-203ENST00000527275 RHOXF1Q8NHV9 184 aa17.27■□□□□ 0.36
SMPD1-203ENST00000527275 DGCR6LQ9BY27 220 aa17.27■□□□□ 0.36
SMPD1-203ENST00000527275 DUSP21Q9H596 190 aa17.27■□□□□ 0.36
SMPD1-203ENST00000527275 REV1Q9UBZ9 1251 aa17.27■□□□□ 0.36
SMPD1-203ENST00000527275 MSRB2Q9Y3D2 182 aa17.27■□□□□ 0.36
SMPD1-203ENST00000527275 APC2O95996 2303 aa17.27■□□□□ 0.35
SMPD1-203ENST00000527275 FRG2CA6NGY1 282 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 TMEM200CA6NKL6 621 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 TTC36A6NLP5 189 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 CLDN24A6NM45 220 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 IGKV1D-16P01601 117 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 THBS1P07996 1170 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 OSMP13725 252 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 POU1F1P28069 291 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 RGS8P57771 180 aaPredicted RBP17.26■□□□□ 0.35
SMPD1-203ENST00000527275 DCAF7P61962 342 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 CLN3Q13286 438 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 ATP1A4Q13733 1029 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 ZNF836Q6ZNA1 936 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 ZAR1Q86SH2 424 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 RAB43Q86YS6 212 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 CLVS1Q8IUQ0 354 aaPredicted RBP17.26■□□□□ 0.35
SMPD1-203ENST00000527275 P3H2Q8IVL5 708 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 ZNF441Q8N8Z8 693 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 OR8K3Q8NH51 312 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 CCDC90BQ9GZT6 254 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 ACACAQ13085 2346 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 CPSF4LA6NMK7 179 aaKnown RBP17.26■□□□□ 0.35
SMPD1-203ENST00000527275 AP3D1O14617 1153 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 FAM20BO75063 409 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 CYP7B1O75881 506 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 DBIP07108 87 aaKnown RBP17.26■□□□□ 0.35
SMPD1-203ENST00000527275 IFNA8P32881 189 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 KRT20P35900 424 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 CSNK2BP67870 215 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 EEF1A1P68104 462 aaKnown RBP17.26■□□□□ 0.35
SMPD1-203ENST00000527275 SLC35A2P78381 396 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 HOXC5Q00444 222 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 MAPK14Q16539 360 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 TMEM236Q5W0B7 351 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 B3GNT6Q6ZMB0 384 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 BCORP1Q8N888 145 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 ZNF540Q8NDQ6 660 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 C17orf47Q8NEP4 570 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 OR4K5Q8NGD3 323 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 NUBPLQ8TB37 319 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 POLR2J3Q9H1A7 115 aaKnown RBP17.26■□□□□ 0.35
SMPD1-203ENST00000527275 MMP25Q9NPA2 562 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 ERVK-18Q9QC07 812 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 DMXL2Q8TDJ6 3036 aa17.26■□□□□ 0.35
SMPD1-203ENST00000527275 CENPVL1A0A0U1RR11 272 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 ZAR1LA6NP61 321 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 ZFAND5O76080 213 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 HPP00738 406 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 RPS4Y1P22090 263 aaKnown RBP17.25■□□□□ 0.35
SMPD1-203ENST00000527275 EIPR1Q53HC9 387 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 ZER1Q7Z7L7 766 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 M1APQ8TC57 530 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 PMM1Q92871 262 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 FGF11Q92914 225 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 SLC38A4Q969I6 547 aa17.25■□□□□ 0.35
SMPD1-203ENST00000527275 MCHR1Q99705 422 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms