RNA–Protein interactions for RNA: ENST00000477100.1

TRBVB-201, Transcript of T cell receptor beta variable B (pseudogene), humanhuman

BASIC

Gene TRBVB, Length 408 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVB-201ENST00000477100 OR52P1PQ8NH57 321 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 GIMAP1Q8WWP7 306 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 GLYATL1Q969I3 302 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 MRPL53Q96EL3 112 aaKnown RBP0.55□□□□□ -2.32
TRBVB-201ENST00000477100 TMEM80Q96HE8 168 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 COL21A1Q96P44 957 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 APOOQ9BUR5 198 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 NTMT1Q9BV86 223 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 FUNDC2Q9BWH2 189 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 SRD5A3Q9H8P0 318 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 FANCFQ9NPI8 374 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 DDX28Q9NUL7 540 aaKnown RBP0.55□□□□□ -2.32
TRBVB-201ENST00000477100 LRBAP50851 2863 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 TARBP1Q13395 1621 aaKnown RBP0.55□□□□□ -2.32
TRBVB-201ENST00000477100 SHROOM2Q13796 1616 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 PREX2Q70Z35 1606 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 COL22A1Q8NFW1 1626 aaPredicted RBP0.55□□□□□ -2.32
TRBVB-201ENST00000477100 DOPEY2Q9Y3R5 2298 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 SHROOM3Q8TF72 1996 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 ZC3H13Q5T200 1668 aaKnown RBP0.55□□□□□ -2.32
TRBVB-201ENST00000477100 TNRC6CQ9HCJ0 1690 aaKnown RBP0.55□□□□□ -2.32
TRBVB-201ENST00000477100 PRUNE2Q8WUY3 3088 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 NUP188Q5SRE5 1749 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 CASZ1Q86V15 1759 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 PAPPA2Q9BXP8 1791 aa0.55□□□□□ -2.32
TRBVB-201ENST00000477100 SSPOA2VEC9 5147 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 LAMA3Q16787 3333 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 XIRP2A4UGR9 3374 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 ICE1Q9Y2F5 2266 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 PTPRQQ9UMZ3 2332 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 PRRC2CQ9Y520 2896 aaKnown RBP0.54□□□□□ -2.32
TRBVB-201ENST00000477100 SMIM28A0A1B0GU29 152 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 GFYI3L273 518 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 SLC30A4O14863 429 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 FAM189A1O60320 539 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 HCN1O60741 890 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 CTDNEP1O95476 244 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 IGSF6O95976 241 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 PGK2P07205 417 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 TSPY3P0CV98 308 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 TSPY8P0CW00 308 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 KIR3DL2P43630 455 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 KIR2DS2P43631 304 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 RPL29P47914 159 aaKnown RBP0.54□□□□□ -2.32
TRBVB-201ENST00000477100 STX1AQ16623 288 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 RABGAP1LQ5R372 815 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 CASC10Q5T4H9 136 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 LRRC38Q5VT99 294 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 CD164L2Q6UWJ8 174 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 DNM1P46Q6ZS02 220 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 Q6ZS52 159 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 LCA5Q86VQ0 697 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 CHCHD4Q8N4Q1 142 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 OR2T33Q8NG76 320 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 HAS2Q92819 552 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 NAP1L4Q99733 375 aaKnown RBP0.54□□□□□ -2.32
TRBVB-201ENST00000477100 GANQ9H2C0 597 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 MYH16Q9H6N6 1097 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 ZNF430Q9H8G1 570 aaPredicted RBP0.54□□□□□ -2.32
TRBVB-201ENST00000477100 DCDC2Q9UHG0 476 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 NUFIP1Q9UHK0 495 aaKnown RBP0.54□□□□□ -2.32
TRBVB-201ENST00000477100 DHRS7Q9Y394 339 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 STAB2Q8WWQ8 2551 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 MARF1Q9Y4F3 1742 aaKnown RBP0.54□□□□□ -2.32
TRBVB-201ENST00000477100 COL18A1P39060 1754 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 TUBGCP6Q96RT7 1819 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 APCP25054 2843 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 WRNQ14191 1432 aaPredicted RBP eCLIP0.54□□□□□ -2.32
TRBVB-201ENST00000477100 TRAPPC8Q9Y2L5 1435 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 SONP18583 2426 aaKnown RBP0.54□□□□□ -2.32
TRBVB-201ENST00000477100 CAMSAP2Q08AD1 1489 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 MLH3Q9UHC1 1453 aa0.54□□□□□ -2.32
TRBVB-201ENST00000477100 SYNMO15061 1565 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 GLI2P10070 1586 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 CACNA1DQ01668 2161 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 FAT4Q6V0I7 4981 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 RREB1Q92766 1687 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 CSPG4Q6UVK1 2322 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 OTOGQ6ZRI0 2925 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 NBASA2RRP1 2371 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 CACNA1HO95180 2353 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 COL12A1Q99715 3063 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 PLXNA3P51805 1871 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 LRIT2A6NDA9 550 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 NPIPA2E9PIF3 369 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 RPL36A-HNRNPH2H7BZ11 118 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 RAMP1O60894 148 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 SDC3O75056 442 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 CHRNGP07510 517 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 KRTAP2-3P0C7H8 128 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 CRISP2P16562 243 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 FRKP42685 505 aaPredicted RBP0.53□□□□□ -2.32
TRBVB-201ENST00000477100 ACADSBP45954 432 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 CRISP3P54108 245 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 GEMP55040 296 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 DEFA6Q01524 100 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 PLOD1Q02809 727 aaPredicted RBP0.53□□□□□ -2.32
TRBVB-201ENST00000477100 EXOSC7Q15024 291 aaKnown RBP0.53□□□□□ -2.32
TRBVB-201ENST00000477100 RAB35Q15286 201 aa0.53□□□□□ -2.32
TRBVB-201ENST00000477100 EPC2Q52LR7 807 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms