RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, human

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-205	ENST00000463675	ZNF136	P52737	540 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	ARFIP2	P53365	341 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	CLDN15	P56746	228 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	PLAUR	Q03405	335 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	FGFBP1	Q14512	234 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	MAPK11	Q15759	364 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	GGN	Q86UU5	652 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	GRAMD2A	Q8IUY3	354 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	C10orf111	Q8N326	155 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	MEIOB	Q8N635	442 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	RELL2	Q8NC24	303 aa	Predicted RBP	13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	ZPLD1	Q8TCW7	415 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	MAL2	Q969L2	176 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	ZBTB8A	Q96BR9	441 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	ZNF845	Q96IR2	970 aa	Predicted RBP	13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	TRNT1	Q96Q11	434 aa	Known RBP	13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	PINK1	Q9BXM7	581 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	CCDC134	Q9H6E4	229 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	POLE3	Q9NRF9	147 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	VAPA	Q9P0L0	249 aa		13.69	□□□□□ -0.22
SNU13-205	ENST00000463675	DCHS2	Q6V1P9	2916 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	ITPR2	Q14571	2701 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	MBD3L3	A6NE82	208 aa	Predicted RBP	13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	CLIC1	O00299	241 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	EIF1AY	O14602	144 aa	Known RBP	13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	TGM6	O95932	706 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	PSMA4	P25789	261 aa	Known RBP	13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	SHC1	P29353	583 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	SFTPD	P35247	375 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	SUMO3	P55854	103 aa	Predicted RBP	13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	QPRT	Q15274	297 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	LRIF1	Q5T3J3	769 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	EIF3M	Q7L2H7	374 aa	Known RBP	13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	DHDDS	Q86SQ9	333 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	RETREG3	Q86VR2	466 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	OR5W2	Q8NH69	310 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	LILRB4	Q8NHJ6	448 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	FBXO27	Q8NI29	283 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	TMEM19	Q96HH6	336 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	THUMPD3	Q9BV44	507 aa	Known RBP	13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	SAP130	Q9H0E3	1048 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	RABEP2	Q9H5N1	569 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	IKZF5	Q9H5V7	419 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	HHATL	Q9HCP6	504 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	LIPT1	Q9Y234	373 aa		13.68	□□□□□ -0.22
SNU13-205	ENST00000463675	NOTCH2	Q04721	2471 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675		A0A1W2PP18	115 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	C7orf72	A4D263	438 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	SLC22A20	A6NK97	555 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	HSPB2	A8KAH6	182 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	TNFSF11	O14788	317 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	ANGPT2	O15123	496 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	IL2RA	P01589	272 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	PRKCA	P17252	672 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	CEACAM8	P31997	349 aa	Predicted RBP	13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	RYK	P34925	604 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	PGM1	P36871	562 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	EIF1AX	P47813	144 aa	Known RBP	13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	TXNL4A	P83876	142 aa	Known RBP	13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	TFF3	Q07654	80 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	FOXF2	Q12947	444 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	CBFB	Q13951	182 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.67	□□□□□ -0.22	5e-6	■■□□□ 14.5
SNU13-205	ENST00000463675	RGN	Q15493	299 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	HSPB2	Q16082	182 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	GLYR1	Q49A26	553 aa	Predicted RBP	13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	SP5	Q6BEB4	398 aa	Predicted RBP	13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	POMZP3	Q6PJE2	187 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	LRRC74B	Q6ZQY2	392 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	CHMP1B	Q7LBR1	199 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	P4HA3	Q7Z4N8	544 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	ADGRE4P	Q86SQ3	457 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	FAM71C	Q8NEG0	241 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	ATP6V1C2	Q8NEY4	427 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	TOR1AIP2	Q8NFQ8	470 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	GPR119	Q8TDV5	335 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	SLC38A5	Q8WUX1	472 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	WDR60	Q8WVS4	1066 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	FIG4	Q92562	907 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	CNOT9	Q92600	299 aa	Known RBP	13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	MARVELD3	Q96A59	401 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	INTS12	Q96CB8	462 aa	Known RBP	13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	KCNJ16	Q9NPI9	418 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	LEF1	Q9UJU2	399 aa	Predicted RBP	13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	AP4B1	Q9Y6B7	739 aa		13.67	□□□□□ -0.22
SNU13-205	ENST00000463675	FBN2	P35556	2912 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	TRBV5-3	A0A0A0MS03	114 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	AGAP5	A6NIR3	686 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	AP3D1	O14617	1153 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	EEF1E1	O43324	174 aa	Known RBP	13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	EIF4E2	O60573	245 aa	Known RBP	13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	ADAM11	O75078	769 aa		13.66	□□□□□ -0.22
SNU13-205	ENST00000463675	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.66	□□□□□ -0.22

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