RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 ZDHHC21Q8IVQ6 265 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 UMODL1-AS1Q8N2C9 162 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 TEX26Q8N6G2 289 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 EXTL1Q92935 676 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 ORAI1Q96D31 301 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 MSLNLQ96KJ4 702 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 MTERF1Q99551 399 aaKnown RBP6.87□□□□□ -1.31
GARNL3-205ENST00000435213 MESP1Q9BRJ9 268 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 MCOLN1Q9GZU1 580 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 TMEM138Q9NPI0 162 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 RNF19AQ9NV58 838 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 TMEM30AQ9NV96 361 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 C1orf109Q9NX04 203 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 NUDT4Q9NZJ9 180 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 APOBEC3BQ9UH17 382 aaKnown RBP6.87□□□□□ -1.31
GARNL3-205ENST00000435213 IL17BQ9UHF5 180 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF490Q9ULM2 529 aaPredicted RBP6.87□□□□□ -1.31
GARNL3-205ENST00000435213 SAMD4AQ9UPU9 718 aaKnown RBP6.87□□□□□ -1.31
GARNL3-205ENST00000435213 SLC27A6Q9Y2P4 619 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 KCTD3Q9Y597 815 aa6.87□□□□□ -1.31
GARNL3-205ENST00000435213 KIAA0100Q14667 2235 aaKnown RBP6.86□□□□□ -1.31
GARNL3-205ENST00000435213 TRBV5-3A0A0A0MS03 114 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 MCRIP1C9JLW8 97 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 E9PQ18 207 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 ITPKAP23677 461 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 DAPP51397 102 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 CCR5P51681 352 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 AP3S2P59780 193 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 ERVPABLB-1P60509 514 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 CDK6Q00534 326 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 ARHGAP15Q53QZ3 475 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 GCNT6Q5T4J0 391 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 ZDHHC20Q5W0Z9 365 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 LEMD1Q68G75 181 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 OR2T5Q6IEZ7 315 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 IL27RAQ6UWB1 636 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 ERN2Q76MJ5 926 aaKnown RBP6.86□□□□□ -1.31
GARNL3-205ENST00000435213 CTU1Q7Z7A3 348 aaKnown RBP6.86□□□□□ -1.31
GARNL3-205ENST00000435213 MSRB3Q8IXL7 192 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 CFAP206Q8IYR0 622 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 OR2T29Q8NH02 315 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 OR4C6Q8NH72 309 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 PXYLP1Q8TE99 480 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 NPRL2Q8WTW4 380 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 CNOT9Q92600 299 aaKnown RBP6.86□□□□□ -1.31
GARNL3-205ENST00000435213 C14orf79Q96F83 325 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 FCRL2Q96LA5 508 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-205ENST00000435213 ASIC5Q9NY37 505 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 DYRK1BQ9Y463 629 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 A0A1W2PPE3 182 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 MYBPHLA2RUH7 354 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 H3BRB1 525 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 TP53I11O14683 189 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 RNF13O43567 381 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 TCF21O43680 179 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 SLC35G4P0C7Q5 338 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 NCF1P14598 390 aaPredicted RBP6.86□□□□□ -1.31
GARNL3-205ENST00000435213 CNR1P21554 472 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 RGS4P49798 205 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 PRRX1P54821 245 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 PPP1R8Q12972 351 aaKnown RBP6.86□□□□□ -1.31
GARNL3-205ENST00000435213 DEF8Q6ZN54 512 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 PXKQ7Z7A4 578 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 GPSM1Q86YR5 675 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 CLDN22Q8N7P3 220 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 OR9Q1Q8NGQ5 310 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 PHYHIPQ92561 330 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 FAM120BQ96EK7 910 aaKnown RBP6.86□□□□□ -1.31
GARNL3-205ENST00000435213 CMTM7Q96FZ5 175 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 CRISPLD1Q9H336 500 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 IKZF5Q9H5V7 419 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 SLC25A37Q9NYZ2 338 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 GALPQ9UBC7 116 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 ZDHHC8Q9ULC8 765 aa6.86□□□□□ -1.31
GARNL3-205ENST00000435213 UBA6A0AVT1 1052 aaPredicted RBP6.85□□□□□ -1.31
GARNL3-205ENST00000435213 MYO1GB0I1T2 1018 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 WNT9AO14904 365 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 EREGO14944 169 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 F10P00742 488 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 ZNF35P13682 527 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 GABRB1P18505 474 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 FGF7P21781 194 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 PSMA1P25786 263 aaKnown RBP6.85□□□□□ -1.31
GARNL3-205ENST00000435213 APEX1P27695 318 aaKnown RBP6.85□□□□□ -1.31
GARNL3-205ENST00000435213 CDKN1CP49918 316 aaPredicted RBP6.85□□□□□ -1.31
GARNL3-205ENST00000435213 HTR6P50406 440 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 GZMMP51124 257 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 RAG2P55895 527 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 RAP1BP61224 184 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 MRPL49Q13405 166 aaKnown RBP6.85□□□□□ -1.31
GARNL3-205ENST00000435213 SLBPQ14493 270 aaKnown RBP eCLIP6.85□□□□□ -1.31
GARNL3-205ENST00000435213 Q5PR19 223 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 HIST2H3PS2Q5TEC6 136 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 FBXW9Q5XUX1 488 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 NXPE4Q6UWF7 544 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 CXXC5Q7LFL8 322 aaKnown RBP6.85□□□□□ -1.31
GARNL3-205ENST00000435213 TMCO2Q7Z6W1 182 aaPredicted RBP6.85□□□□□ -1.31
GARNL3-205ENST00000435213 THNSL2Q86YJ6 484 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 ARRDC2Q8TBH0 407 aa6.85□□□□□ -1.31
GARNL3-205ENST00000435213 XAGE5Q8WWM1 108 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms