RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 GPR148Q8TDV2 347 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 CHFRQ96EP1 664 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 PHB2Q99623 299 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 UTP23Q9BRU9 249 aaKnown RBP9.75□□□□□ -0.85
COL4A6-203ENST00000394872 FUNDC2Q9BWH2 189 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 SLC6A16Q9GZN6 736 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 HAO2Q9NYQ3 351 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 LHX3Q9UBR4 397 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 YARS2Q9Y2Z4 477 aaKnown RBP9.75□□□□□ -0.85
COL4A6-203ENST00000394872 PCDHGA7Q9Y5G6 932 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 UGT2B7P16662 529 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 HIST1H1TP22492 207 aaPredicted RBP9.75□□□□□ -0.85
COL4A6-203ENST00000394872 MYF6P23409 242 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 AFF3P51826 1226 aaKnown RBP9.75□□□□□ -0.85
COL4A6-203ENST00000394872 HOXC5Q00444 222 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 PKDCCQ504Y2 493 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 MOB3CQ70IA8 216 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 MFSD9Q8NBP5 474 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 OR1J4Q8NGS1 313 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 OR5K2Q8NHB8 316 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF480Q8WV37 535 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 FOXN4Q96NZ1 517 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 TRAV27A0A087WT01 109 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 AOAHP28039 575 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 CAV3P56539 151 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 SLC14A2Q15849 920 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 VRK2Q86Y07 508 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 BPIFA2Q96DR5 249 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 PRRC1Q96M27 445 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 NUDT22Q9BRQ3 303 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 NTMT1Q9BV86 223 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 UBQLN4Q9NRR5 601 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 NWD2Q9ULI1 1742 aa9.75□□□□□ -0.85
COL4A6-203ENST00000394872 TVP23AA6NH52 213 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 DNAJB6O75190 326 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 IGHG1P01857 330 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 OR8U9P0C7N5 309 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 PSMB10P40306 273 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 PCBD1P61457 104 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 RAB41Q5JT25 222 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 LRRC18Q8N456 261 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 OR14A16Q8NHC5 309 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 PBDC1Q9BVG4 233 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 CSNK1G1Q9HCP0 422 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 LSM5Q9Y4Y9 91 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 H0YGG7 62 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 MRPL33O75394 65 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 KCNK5O95279 499 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 EDN1P05305 212 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 RETP07949 1114 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF14P17017 642 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 RRADP55042 308 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 ENTPD8Q5MY95 495 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 KIAA0907Q7Z7F0 614 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 MMP21Q8N119 569 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 OR1S1Q8NH92 325 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 NGBQ9NPG2 151 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 EBF1Q9UH73 591 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 AK6Q9Y3D8 172 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 RRP8O43159 456 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 GPR39O43194 453 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 WNT4P56705 351 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 DCAF7P61962 342 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 RPP30P78346 268 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 RAB31Q13636 194 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 NCCRP1Q6ZVX7 275 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 CHDHQ8NE62 594 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 OR5D14Q8NGL3 314 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 S100PBPQ96BU1 408 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 TSNAXQ99598 290 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 CCDC32Q9BV29 185 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 GOLGA4Q13439 2230 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 LOC285095A0A1B0GVY8 99 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 CENPBD1B2RD01 187 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 RPS17P08708 135 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 BMP4P12644 408 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 PRDX3P30048 256 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 PRSS3P35030 304 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 DCDP81605 110 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 AKR1C8PQ5T2L2 129 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 SLC22A10Q63ZE4 541 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 PAPD5Q8NDF8 572 aaKnown RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF681Q96N22 645 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 SMIM14Q96QK8 99 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 SLC25A18Q9H1K4 315 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 GAREM1Q9H706 876 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 PRSS16Q9NQE7 514 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 ARPC4-TTLL3A0A0A6YYG9 625 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 ETV5P41161 510 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 SSR4P51571 173 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 MBTPS1Q14703 1052 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 OR1Q1Q15612 314 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 BCL2A1Q16548 175 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 ZNF417Q8TAU3 575 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 TMEM246Q9BRR3 403 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 DPCDQ9BVM2 203 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 ULBP2Q9BZM5 246 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 SDR39U1Q9NRG7 319 aaPredicted RBP9.74□□□□□ -0.85
COL4A6-203ENST00000394872 TP53TG5Q9Y2B4 290 aa9.74□□□□□ -0.85
COL4A6-203ENST00000394872 MYH10P35580 1976 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms