RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 PYHIN1Q6K0P9 492 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 C3P1Q6ZMU1 363 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 ZNF440Q8IYI8 595 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 RNF113BQ8IZP6 322 aaKnown RBP10.97□□□□□ -0.65
TRAK1-202ENST00000341421 FGF13Q92913 245 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 FCRL1Q96LA6 429 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 DDX31Q9H8H2 851 aaKnown RBP10.97□□□□□ -0.65
TRAK1-202ENST00000341421 PRSS16Q9NQE7 514 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 EMC3Q9P0I2 261 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 UPB1Q9UBR1 384 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 CACNG2Q9Y698 323 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 TMEM129A0AVI4 362 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 SCDO00767 359 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 TBX19O60806 448 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 ECDO95905 644 aaPredicted RBP10.97□□□□□ -0.65
TRAK1-202ENST00000341421 TGM6O95932 706 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 S100A6P06703 90 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 RAE1P78406 368 aaKnown RBP10.97□□□□□ -0.65
TRAK1-202ENST00000341421 ASTLQ6HA08 431 aaPredicted RBP10.97□□□□□ -0.65
TRAK1-202ENST00000341421 SPAG16Q8N0X2 631 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 ADAMTS18Q8TE60 1221 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 MARVELD3Q96A59 401 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 ZNF578Q96N58 590 aaPredicted RBP10.97□□□□□ -0.65
TRAK1-202ENST00000341421 KXD1Q9BQD3 176 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 FUZQ9BT04 418 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 OR52A5Q9H2C5 316 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 EVA1BQ9NVM1 165 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 ZNF236Q9UL36 1845 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 ZNF443Q9Y2A4 671 aaPredicted RBP10.97□□□□□ -0.65
TRAK1-202ENST00000341421 CSNK1G3Q9Y6M4 447 aa10.97□□□□□ -0.65
TRAK1-202ENST00000341421 LINC00862A6NCI5 91 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 FAM227AF5H4B4 570 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 IFNA6P05013 189 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 FCER2P06734 321 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 ZNF888P0CJ79 500 aaPredicted RBP10.96□□□□□ -0.65
TRAK1-202ENST00000341421 RNH1P13489 461 aaKnown RBP10.96□□□□□ -0.65
TRAK1-202ENST00000341421 COL9A2Q14055 689 aaPredicted RBP10.96□□□□□ -0.65
TRAK1-202ENST00000341421 ZMYND11Q15326 602 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 OR52I1Q8NGK6 324 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 OR6T1Q8NGN1 323 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 CREB3L4Q8TEY5 395 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 SPRYD4Q8WW59 207 aaPredicted RBP10.96□□□□□ -0.65
TRAK1-202ENST00000341421 S100A16Q96FQ6 103 aaKnown RBP10.96□□□□□ -0.65
TRAK1-202ENST00000341421 ADAD1Q96M93 576 aaKnown RBP10.96□□□□□ -0.65
TRAK1-202ENST00000341421 BCL2L10Q9HD36 194 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 SIRT5Q9NXA8 310 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 SCP2D1Q9UJQ7 156 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 OTOFQ9HC10 1997 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 C2orf92A0A1B0GVN3 265 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 hCG_1807616A0A1W2PRN6 198 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 HMGN4O00479 90 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 KLF8O95600 359 aaPredicted RBP10.96□□□□□ -0.65
TRAK1-202ENST00000341421 RAB3AP20336 220 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 RAB3BP20337 219 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 PTBP1P26599 531 aaKnown RBP eCLIP10.96□□□□□ -0.652e-6■□□□□ 9.7
TRAK1-202ENST00000341421 SLC1A3P43003 542 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 CLLU1Q5K131 121 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 TCTN3Q6NUS6 607 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 SLC48A1Q6P1K1 146 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 LILRA6Q6PI73 481 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 VRK2Q86Y07 508 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 OR4N5Q8IXE1 308 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 PDZD9Q8IXQ8 264 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 CHST4Q8NCG5 386 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 KCTD12Q96CX2 325 aaKnown RBP10.96□□□□□ -0.65
TRAK1-202ENST00000341421 OPALINQ96PE5 141 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 CNN2Q99439 309 aaKnown RBP10.96□□□□□ -0.65
TRAK1-202ENST00000341421 THAP7Q9BT49 309 aaPredicted RBP10.96□□□□□ -0.65
TRAK1-202ENST00000341421 DPH1Q9BZG8 443 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 BCL2L14Q9BZR8 327 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 OBP2AQ9NY56 170 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 COPS7AQ9UBW8 275 aa10.96□□□□□ -0.65
TRAK1-202ENST00000341421 K7ESM1 405 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 GMDSO60547 372 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 WDPCPO95876 746 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 LGI1O95970 557 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 TPOP07202 933 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 MMP11P24347 488 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 FPR3P25089 353 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 GZMMP51124 257 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 DUSP6Q16828 381 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 FAM78AQ5JUQ0 283 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 C6orf132Q5T0Z8 1188 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 HACD4Q5VWC8 232 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 ABHD17CQ6PCB6 329 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 ZCCHC12Q6PEW1 402 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 VN1R2Q8NFZ6 395 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 OR10H5Q8NGA6 315 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.96□□□□□ -0.66
TRAK1-202ENST00000341421 EGLN3Q9H6Z9 239 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 BABAM2Q9NXR7 383 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 THAP10Q9P2Z0 257 aaPredicted RBP10.96□□□□□ -0.66
TRAK1-202ENST00000341421 BET1O15155 118 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 CSTAP01040 98 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 CTSLP07711 333 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 HMGA2P52926 109 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 VSX2P58304 361 aaPredicted RBP10.96□□□□□ -0.66
TRAK1-202ENST00000341421 SEC23BQ15437 767 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 RPE65Q16518 533 aa10.96□□□□□ -0.66
TRAK1-202ENST00000341421 PIP5KL1Q5T9C9 394 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms