RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 SAGE2PA6NJ88 616 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 CPSF4LA6NMK7 179 aaKnown RBP6.59□□□□□ -1.35
NPHP1-201ENST00000316534 ARHGAP33O14559 1287 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 POLR1CO15160 346 aaPredicted RBP6.59□□□□□ -1.35
NPHP1-201ENST00000316534 PIP5K1CO60331 668 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 CNOT3O75175 753 aaKnown RBP6.59□□□□□ -1.35
NPHP1-201ENST00000316534 NTN1O95631 604 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 NAGAP17050 411 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 MAP2K4P45985 399 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 PNLIPRP2P54317 469 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 MC2RQ01718 297 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 ZNF91Q05481 1191 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 SLC13A2Q13183 592 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 SRSF5Q13243 272 aaKnown RBP6.59□□□□□ -1.35
NPHP1-201ENST00000316534 ZNHIT3Q15649 155 aaPredicted RBP6.59□□□□□ -1.35
NPHP1-201ENST00000316534 SLC25A53Q5H9E4 307 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 PDZK1Q5T2W1 519 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 TMEM236Q5W0B7 351 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 SLC27A4Q6P1M0 643 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 OVCH1Q7RTY7 1134 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 ZNF321PQ8N8H1 164 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 EXD3Q8N9H8 876 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 APCDD1LQ8NCL9 501 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 GPR151Q8TDV0 419 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.59□□□□□ -1.35
NPHP1-201ENST00000316534 CNOT9Q92600 299 aaKnown RBP6.59□□□□□ -1.35
NPHP1-201ENST00000316534 NUDT9Q9BW91 350 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 NMNAT2Q9BZQ4 307 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 FAM117AQ9C073 453 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 DSN1Q9H410 356 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 ERVK-19Q9WJR5 959 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 SF3B6Q9Y3B4 125 aaKnown RBP6.59□□□□□ -1.35
NPHP1-201ENST00000316534 SNX5Q9Y5X3 404 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 PMF1-BGLAPU3KQ54 211 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 C17orf105B2RV13 164 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 ALG1L2C9J202 215 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 M0R296 226 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 IMPA2O14732 288 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 CD1AP06126 327 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 HTR1FP30939 366 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 CCKBRP32239 447 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 BDH1Q02338 343 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 STX4Q12846 297 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 FGD3Q5JSP0 725 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 CDCP2Q5VXM1 449 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 ULK3Q6PHR2 472 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 GDPGP1Q6ZNW5 385 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 ANKRD37Q7Z713 158 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 TAGAPQ8N103 731 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 SLC38A9Q8NBW4 561 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 OR52I1Q8NGK6 324 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 RBM18Q96H35 190 aaKnown RBP6.59□□□□□ -1.35
NPHP1-201ENST00000316534 TMEM80Q96HE8 168 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 OPALINQ96PE5 141 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 PRR14Q9BWN1 585 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 WWTR1Q9GZV5 400 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 MCCC2Q9HCC0 563 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 KRCC1Q9NPI7 259 aaPredicted RBP6.59□□□□□ -1.35
NPHP1-201ENST00000316534 GPR83Q9NYM4 423 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 CCDC59Q9P031 241 aaKnown RBP6.59□□□□□ -1.35
NPHP1-201ENST00000316534 CHRNA9Q9UGM1 479 aa6.59□□□□□ -1.35
NPHP1-201ENST00000316534 UNC119BA6NIH7 251 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 B4E171 279 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 LAMTOR5O43504 91 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 OR10H2O60403 315 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 EIF4E2O60573 245 aaKnown RBP6.59□□□□□ -1.36
NPHP1-201ENST00000316534 NPIPB7O75200 414 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 IGHMP01871 453 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 SP9P0CG40 484 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 CCNA2P20248 432 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 LIPAP38571 399 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 TSPAN7P41732 249 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 GINS1Q14691 196 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 SPCS2Q15005 226 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 SSX1Q16384 188 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 PTCHD4Q6ZW05 846 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 PLEKHM3Q6ZWE6 761 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 MFSD4AQ8N468 514 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 C3orf49Q96BT1 292 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 ZNF524Q96C55 264 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 FAM46AQ96IP4 442 aaKnown RBP6.59□□□□□ -1.36
NPHP1-201ENST00000316534 CCDC74BQ96LY2 380 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 B3GNT4Q9C0J1 378 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 EGLN3Q9H6Z9 239 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 UBQLN4Q9NRR5 601 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 FGF21Q9NSA1 209 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 NDUFB11Q9NX14 153 aa6.59□□□□□ -1.36
NPHP1-201ENST00000316534 A0A1B0GWA3 101 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 OR6C70A6NIJ9 312 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 FRS3O43559 492 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 TIAF1O95411 115 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 PTHP01270 115 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 APEHP13798 732 aaKnown RBP6.58□□□□□ -1.36
NPHP1-201ENST00000316534 CPEP16870 476 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 C21orf33P30042 268 aaPredicted RBP6.58□□□□□ -1.36
NPHP1-201ENST00000316534 UQCRC1P31930 480 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 ST3GAL4Q11206 333 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 MLLT11Q13015 90 aaPredicted RBP6.58□□□□□ -1.36
NPHP1-201ENST00000316534 CROCCP3Q8IVE0 287 aa6.58□□□□□ -1.36
NPHP1-201ENST00000316534 SLC34A3Q8N130 599 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms