RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Btg4O70552 250 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Lancl1O89112 399 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Bglap3P54615 95 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Map3k8Q07174 467 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Mfsd4aQ6PDC8 510 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 SnupnQ80W37 358 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Fbxl21Q8BFZ4 434 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 GskipQ8BGR8 139 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Slc5a7Q8BGY9 580 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zfp709Q8VC29 727 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tmem45bQ8VCZ2 278 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr109Q8VG96 314 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Taldo1Q93092 337 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Tmem43Q9DBS1 400 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cts6Q9ET52 334 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Malrd1A2AJX4 2123 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr228A0A1L1SR98 313 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm6619F6URP1 175 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 H2-T3P14432 384 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 AcrP23578 436 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Fgf9P54130 208 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dcst1Q059Y8 732 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zic2Q62520 530 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Surf4Q64310 269 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Enpp3Q6DYE8 874 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 PcnpQ6P8I4 178 aaKnown RBP9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Methig1Q76I26 264 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr1231Q7TQZ8 313 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr857Q7TRF7 309 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Trmt12Q8BG71 446 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Luzp2Q8BGY3 345 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cox15Q8BJ03 413 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Hat1Q8BY71 416 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dlgap5Q8K4R9 808 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cmss1Q9CZT6 276 aaKnown RBP9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Fank1Q9DAM9 344 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Nacc2Q9DCM7 586 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ybx2Q9Z2C8 360 aaKnown RBP9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rp1l1Q8CGM2 1859 aa9.16□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Trbc2A0A075B5J4 173 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Trbc1A0A0A6YWV4 173 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Pcdhgb8A0A140LI48 931 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ssc4dA1L0T3 586 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm266A6H634 200 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ccdc149F6V035 524 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Vmn1r169L7N275 304 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Hoxd9P28357 339 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Hnrnpa1P49312 320 aaKnown RBP9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Dbx1P52950 335 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rras2P62071 204 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 FuzQ3UYI6 415 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Atp11bQ6DFW5 1175 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr70Q80ZX9 316 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Samd7Q8C8Y5 445 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr935Q8VG16 308 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr1Q8VGI1 314 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Olfr686Q8VGX3 317 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Ces2cQ91WG0 561 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Mrpl43Q99N89 183 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gnpda2Q9CRC9 276 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Rsph9Q9D9V4 276 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Wdr61Q9ERF3 305 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Orc5Q9WUV0 435 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 D3Ertd254eA0A0G2JEM5 796 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zfp978A2A7I1 335 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm13078A2AGW8 474 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm11758A2BEI6 360 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm11757A2BEI8 360 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Pgm2A2CEK3 580 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Adap1E9PY16 374 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Vmn2r113E9PZA6 856 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm7951E9Q0A2 213 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Vmn2r105E9Q3A5 860 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm6482F6YHC1 213 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm17124F6ZIG1 213 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Gm3327F7C9A1 213 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Zbtb25G3UW50 439 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 NgpO08692 167 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 EllO08856 602 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 ArafP04627 604 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Prph2P15499 346 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cd38P56528 304 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 SnrpnP63163 240 aaKnown RBP9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Fxyd2Q04646 70 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Entpd6Q3U0P5 455 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Elavl3Q60900 367 aaKnown RBP9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Pabpc2Q62029 628 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 MkxQ8BIA3 353 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Cables2Q8K3M5 476 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Clrn1Q8K445 232 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Chp2Q9D869 196 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Natd1Q9DBW3 110 aa9.15□□□□□ -0.94
Ccdc40-202ENSMUST00000053440 Vmn1r90A0A087WR36 309 aa9.15□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr1076A2AK60 313 aa9.15□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gm11127A7VMS2 374 aa9.15□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Zfp54E9PW05 585 aa9.15□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Syn1O88935 706 aa9.15□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Fabp1P12710 127 aa9.15□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Map2k4P47809 397 aa9.15□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Eif4eP63073 217 aaKnown RBP9.15□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms