RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 CgaP01216 120 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gal3st4Q3V1B8 480 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cyb5d2Q5SSH8 263 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cox15Q8BJ03 413 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pomgnt2Q8BW41 605 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Fbxo45Q8K3B1 286 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Vsx1Q91V10 363 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Sh3bp4Q921I6 962 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc41a3Q921R8 488 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 ChmlQ9QZD5 621 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tcrg-V3A0A0G2JEW2 117 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gm266A6H634 200 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Sac3d1A6H687 427 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Skint4A7TZF3 474 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gsg1lD3Z7H4 322 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Atp1b1P14094 304 aaKnown RBP15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Elk1P41969 429 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gdi1P50396 447 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Rras2P62071 204 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 SmsP97355 366 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Trappc13Q3TIR1 417 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc47a2Q3V050 573 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Acvr1bQ61271 505 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Arhgef39Q66JY6 344 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Methig1Q76I26 264 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Klhl12Q8BZM0 568 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tgif2Q8C0Y1 237 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Hbp1Q8R316 516 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Uhrf1Q8VDF2 782 aaKnown RBP15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Msantd3Q9CR78 275 aa15.18■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pdlim3O70209 316 aaKnown RBP15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 OsmrO70458 971 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 RhoP15409 348 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Atp5j2P56135 88 aaKnown RBP15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 CpeQ00493 476 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Prg2Q61878 223 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Adh7Q64437 374 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Ap4e1Q80V94 1122 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cdkl3Q8BLF2 595 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Zdhhc5Q8VDZ4 715 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr1491Q8VEZ5 319 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr686Q8VGX3 317 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc25a36Q922G0 311 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Fam69bQ99ML4 431 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pdzk1ip1Q9CQH0 114 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Aif1lQ9EQX4 150 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 ReckQ9Z0J1 971 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Kntc1Q8C3Y4 2207 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 IghdA0A0A6YW14 291 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Vmn2r110E9PWD5 858 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 KeraO35367 351 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Rnf13O54965 381 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Klrg1O88713 188 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 F10O88947 481 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tyrp1P07147 537 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Wnt11P48615 354 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 LpoQ5SW46 710 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Znf182Q6P560 627 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pum2Q80U58 1066 aaKnown RBP15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Ikzf4Q8C208 586 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Colec12Q8K4Q8 742 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 DutQ8VCG1 200 aaKnown RBP15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Fank1Q9DAM9 344 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Aldh7a1Q9DBF1 539 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Adat1Q9JHI2 499 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Dclk1Q9JLM8 756 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gdf2Q9WV56 428 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gm11127A7VMS2 374 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Hoxa4P06798 285 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cnr2P47936 347 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tgm3Q08189 693 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 DmwdQ08274 665 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Eri2Q5BKS4 688 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 EngQ63961 653 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Carns1Q6ZPS2 827 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Trim46Q7TNM2 759 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr598Q7TRR2 319 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Tmem163Q8C996 288 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 SrrdQ8K2M3 249 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Olfr692Q8VF03 329 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Slc10a6Q9CXB2 373 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Prelid3bQ9CYY7 195 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 5330417H12RikQ9D3P2 110 aa15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Dnajb1Q9QYJ3 340 aaKnown RBP15.17■□□□□ 0.02
Trim28-201ENSMUST00000005705 Pi4kaE9Q3L2 2105 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Cacna1eQ61290 2272 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 KcpQ3U492 1550 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 MgamB5THE2 1827 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 PvrigA0A1B0GS01 234 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 SpaarA0A1B0GSZ0 75 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Vmn2r13L7N1X2 831 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gm7970L7N271 213 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Gm7980L7N471 213 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Mup3P04939 184 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 UrodP70697 367 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Fam187bQ0VAY3 358 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Fam109bQ14B98 259 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Kcnk6Q3TBV4 313 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 Rnf149Q3U2C5 394 aa15.16■□□□□ 0.02
Trim28-201ENSMUST00000005705 B3gnt6Q3USF0 391 aa15.16■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms