RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ADGRA3Q8IWK6 1321 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 ATP6AP2A0A1C7CYW4 349 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 MROH6A6NGR9 719 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 MYMKA6NI61 221 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 LRRC30A6NM36 301 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 PP2D1A8MPX8 630 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 A8MXQ7 604 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 RHODO00212 210 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 HSPA12AO43301 675 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 SLC28A2O43868 658 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 B4GALT3O60512 393 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 SCN2BO60939 215 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 ATP5HO75947 161 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 RNF8O76064 485 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 B3GAT3O94766 335 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 GAPDHP04406 335 aaKnown RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 LCKP06239 509 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CT45A8P0DMV1 189 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CT45A9P0DMV2 189 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CDK4P11802 303 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 KCNE1P15382 129 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 HOXB8P17481 243 aaPredicted RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 MSH3P20585 1137 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CCNOP22674 350 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CCNE1P24864 410 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 HNRNPH1P31943 449 aaKnown RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 MNDAP41218 407 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 NAA10P41227 235 aaPredicted RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 TUFMP49411 452 aaKnown RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CTSCP53634 463 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 STX17P56962 302 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 B2MP61769 119 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CDH17Q12864 832 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 PIGHQ14442 188 aaPredicted RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 PTPRRQ15256 657 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 IL17AQ16552 155 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CDKN3Q16667 212 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 BEAN1Q3B7T3 259 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 SMUG1Q53HV7 270 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CT45A2Q5DJT8 189 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 ELFN2Q5R3F8 820 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 RTL6Q6ICC9 239 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 SLC8B1Q6J4K2 584 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 DOK6Q6PKX4 331 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CEACAM20Q6UY09 585 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 FRA10AC1Q70Z53 315 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 SSX9Q7RTT3 188 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 GOLGA7Q7Z5G4 137 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 SCD5Q86SK9 330 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 VPS36Q86VN1 386 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 SFR1Q86XK3 245 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 LDLRAD3Q86YD5 345 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 TGIF2LXQ8IUE1 241 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 ZC3H3Q8IXZ2 948 aaKnown RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 DCP1BQ8IZD4 617 aaKnown RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 ST13P4Q8IZP2 240 aaPredicted RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 LGI4Q8N135 537 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 TMEM86AQ8N2M4 240 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 LRRC52Q8N7C0 313 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 POC1AQ8NBT0 407 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 OR4D6Q8NGJ1 314 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 OR4D5Q8NGN0 318 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 OR1L6Q8NGR2 347 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 OR13C9Q8NGT0 318 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 OR5R1Q8NH85 324 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 NANPQ8TBE9 248 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 C2orf15Q8WU43 125 aaKnown RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CIDECQ96AQ7 238 aaPredicted RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 SLC25A36Q96CQ1 311 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 AKR1E2Q96JD6 320 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CMKLR1Q99788 373 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 BDH2Q9BUT1 245 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 SHCBP1LQ9BZQ2 653 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 RAB1BQ9H0U4 201 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 DPEP2Q9H4A9 486 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 AAMDCQ9H7C9 122 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 MOV10Q9HCE1 1003 aaKnown RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 PNRC2Q9NPJ4 139 aaKnown RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 XPNPEP1Q9NQW7 623 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 POT1Q9NUX5 634 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 CLEC5AQ9NY25 188 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 RBAKQ9NYW8 714 aaPredicted RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 GNG12Q9UBI6 72 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 RWDD2AQ9UIY3 292 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 ABCG2Q9UNQ0 655 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 EXOGQ9Y2C4 368 aaKnown RBP4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 STYXL1Q9Y6J8 313 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 MCM3APO60318 1980 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 LRRC37A2A6NM11 1700 aa4.68□□□□□ -1.66
VPS35P1-201ENST00000563400 PPIAL4CA0A0B4J2A2 164 aa4.67□□□□□ -1.66
VPS35P1-201ENST00000563400 RAB19A4D1S5 217 aa4.67□□□□□ -1.66
VPS35P1-201ENST00000563400 SRRM4A7MD48 611 aaKnown RBP4.67□□□□□ -1.66
VPS35P1-201ENST00000563400 C5orf67F2Z3F1 127 aa4.67□□□□□ -1.66
VPS35P1-201ENST00000563400 H3BMH7 237 aa4.67□□□□□ -1.66
VPS35P1-201ENST00000563400 STX7O15400 261 aaKnown RBP4.67□□□□□ -1.66
VPS35P1-201ENST00000563400 EDIL3O43854 480 aa4.67□□□□□ -1.66
VPS35P1-201ENST00000563400 SCGNO76038 276 aa4.67□□□□□ -1.66
VPS35P1-201ENST00000563400 MYO1DO94832 1006 aa4.67□□□□□ -1.66
VPS35P1-201ENST00000563400 EML2O95834 649 aa4.67□□□□□ -1.66
VPS35P1-201ENST00000563400 PLAUP00749 431 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms