RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 ATP6V1E2Q96A05 226 aa7.81□□□□□ -1.16
UBE2N-203ENST00000549490 PBKQ96KB5 322 aa7.81□□□□□ -1.16
UBE2N-203ENST00000549490 CPNE1Q99829 537 aa7.81□□□□□ -1.16
UBE2N-203ENST00000549490 VRK1Q99986 396 aaPredicted RBP7.81□□□□□ -1.16
UBE2N-203ENST00000549490 PSD2Q9BQI7 771 aa7.81□□□□□ -1.16
UBE2N-203ENST00000549490 RBM4Q9BWF3 364 aaKnown RBP7.81□□□□□ -1.16
UBE2N-203ENST00000549490 COQ10BQ9H8M1 238 aa7.81□□□□□ -1.16
UBE2N-203ENST00000549490 Q9N2J8 555 aa7.81□□□□□ -1.16
UBE2N-203ENST00000549490 MYOZ1Q9NP98 299 aaPredicted RBP7.81□□□□□ -1.16
UBE2N-203ENST00000549490 SLC35C2Q9NQQ7 365 aa7.81□□□□□ -1.16
UBE2N-203ENST00000549490 FARSBQ9NSD9 589 aaKnown RBP7.81□□□□□ -1.16
UBE2N-203ENST00000549490 SENP1Q9P0U3 644 aa7.81□□□□□ -1.16
UBE2N-203ENST00000549490 TXNDC16Q9P2K2 825 aa7.81□□□□□ -1.16
UBE2N-203ENST00000549490 MRTO4Q9UKD2 239 aaKnown RBP7.81□□□□□ -1.16
UBE2N-203ENST00000549490 PCDHB10Q9UN67 800 aa7.81□□□□□ -1.16
UBE2N-203ENST00000549490 A0A087WV62 115 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 CIB4A0PJX0 185 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 GXYLT2A0PJZ3 443 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 PGRMC1O00264 195 aaKnown RBP7.8□□□□□ -1.16
UBE2N-203ENST00000549490 PSMG1O95456 288 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 STAMBPO95630 424 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 IL3P08700 152 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 LINGO3P0C6S8 592 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 PCMT1P22061 227 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 GIFP27352 417 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 MPIP34949 423 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 GP5P40197 560 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 CCNG1P51959 295 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 PSMD4P55036 377 aaKnown RBP7.8□□□□□ -1.16
UBE2N-203ENST00000549490 TRAF3Q13114 568 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 TMEM176BQ3YBM2 270 aaPredicted RBP7.8□□□□□ -1.16
UBE2N-203ENST00000549490 TCHHL1Q5QJ38 904 aaPredicted RBP7.8□□□□□ -1.16
UBE2N-203ENST00000549490 SHISA2Q6UWI4 295 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 ZNF662Q6ZS27 426 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 USP43Q70EL4 1123 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 ZNF100Q8IYN0 542 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 FAM9CQ8IZT9 166 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 CENPLQ8N0S6 344 aaPredicted RBP7.8□□□□□ -1.16
UBE2N-203ENST00000549490 RHEBL1Q8TAI7 183 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.8□□□□□ -1.16
UBE2N-203ENST00000549490 SH3YL1Q96HL8 342 aaPredicted RBP7.8□□□□□ -1.16
UBE2N-203ENST00000549490 ZNF300Q96RE9 604 aaPredicted RBP7.8□□□□□ -1.16
UBE2N-203ENST00000549490 SNX18Q96RF0 628 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 ELOVL6Q9H5J4 265 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 FKRPQ9H9S5 495 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 GIMAP4Q9NUV9 329 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 NTMQ9P121 344 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 KLHL9Q9P2J3 617 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 C19orf53Q9UNZ5 99 aaPredicted RBP7.8□□□□□ -1.16
UBE2N-203ENST00000549490 TRAF6Q9Y4K3 522 aa7.8□□□□□ -1.16
UBE2N-203ENST00000549490 TNPO3Q9Y5L0 923 aaKnown RBP7.8□□□□□ -1.16
UBE2N-203ENST00000549490 CCT8L1PA6NM43 557 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 E7ESA3 106 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 ATP6V1G2-DDX39BF2Z307 99 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 UPK1AO00322 258 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 ZNF195O14628 629 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 TP73O15350 636 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 SLU7O95391 586 aaKnown RBP7.79□□□□□ -1.16
UBE2N-203ENST00000549490 OXSR1O95747 527 aaPredicted RBP7.79□□□□□ -1.16
UBE2N-203ENST00000549490 PDYNP01213 254 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 IGHV3-9P01782 118 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 CRABP2P29373 138 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 SSTR1P30872 391 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 GABRA3P34903 492 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 SPRP35270 261 aaPredicted RBP7.79□□□□□ -1.16
UBE2N-203ENST00000549490 EIF1P41567 113 aaKnown RBP7.79□□□□□ -1.16
UBE2N-203ENST00000549490 PRIM2P49643 509 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 SNRPD2P62316 118 aaKnown RBP7.79□□□□□ -1.16
UBE2N-203ENST00000549490 RASGEF1BQ0VAM2 473 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 FOXF1Q12946 379 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 SCGB2A2Q13296 93 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 MLC1Q15049 377 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 ZNHIT3Q15649 155 aaPredicted RBP7.79□□□□□ -1.16
UBE2N-203ENST00000549490 PRSS53Q2L4Q9 553 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 GLE1Q53GS7 698 aaKnown RBP7.79□□□□□ -1.16
UBE2N-203ENST00000549490 FAM219BQ5XKK7 198 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 FBXW9Q5XUX1 488 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 METTL2BQ6P1Q9 378 aaKnown RBP7.79□□□□□ -1.16
UBE2N-203ENST00000549490 TMEM107Q6UX40 140 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 SLC46A3Q7Z3Q1 461 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 WDR31Q8NA23 367 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 ATP6V1C2Q8NEY4 427 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 PIK3R3Q92569 461 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 CDKL2Q92772 493 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 MUS81Q96NY9 551 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 NSUN5Q96P11 429 aaKnown RBP7.79□□□□□ -1.16
UBE2N-203ENST00000549490 BBS4Q96RK4 519 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 LMF2Q9BU23 707 aaKnown RBP7.79□□□□□ -1.16
UBE2N-203ENST00000549490 ANKZF1Q9H8Y5 726 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 BRF2Q9HAW0 419 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 HHATLQ9HCP6 504 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 ARMCX1Q9P291 453 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 DMGDHQ9UI17 866 aaKnown RBP7.79□□□□□ -1.16
UBE2N-203ENST00000549490 MCM8Q9UJA3 840 aa7.79□□□□□ -1.16
UBE2N-203ENST00000549490 GOLGA6L10A0A0M3HER8 536 aa7.78□□□□□ -1.16
UBE2N-203ENST00000549490 FAM159BA6NKW6 160 aa7.78□□□□□ -1.16
UBE2N-203ENST00000549490 GJE1A6NN92 205 aa7.78□□□□□ -1.16
UBE2N-203ENST00000549490 ZNF724A8MTY0 619 aa7.78□□□□□ -1.16
UBE2N-203ENST00000549490 MYO1GB0I1T2 1018 aa7.78□□□□□ -1.16
UBE2N-203ENST00000549490 CYTIPO60759 359 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms