RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ZIC1Q15915 447 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 SGCBQ16585 318 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 STX1AQ16623 288 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 DCAF4L1Q3SXM0 396 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 CCDC14Q49A88 953 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 EPC2Q52LR7 807 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 SBK1Q52WX2 424 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 IRGCQ6NXR0 463 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 TFAP2EQ6VUC0 442 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 MOB1BQ7L9L4 216 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 PIWIL3Q7Z3Z3 882 aaKnown RBP2.87□□□□□ -1.95
SNHG1-224ENST00000545688 TMCO2Q7Z6W1 182 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-224ENST00000545688 DEFB128Q7Z7B8 93 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 ERICH1Q86X53 443 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 TMEM105Q8N8V8 129 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 EPSTI1Q96J88 318 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 JPH2Q9BR39 696 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-224ENST00000545688 RIOK1Q9BRS2 568 aaKnown RBP2.87□□□□□ -1.95
SNHG1-224ENST00000545688 DPH7Q9BTV6 452 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 FUNDC2Q9BWH2 189 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 NAPBQ9H115 298 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 OPN3Q9H1Y3 402 aaPredicted RBP2.87□□□□□ -1.95
SNHG1-224ENST00000545688 VCPKMTQ9H867 229 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 HPS4Q9NQG7 708 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 DDX28Q9NUL7 540 aaKnown RBP2.87□□□□□ -1.95
SNHG1-224ENST00000545688 PDE10AQ9Y233 779 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 PTPRSQ13332 1948 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 MYH13Q9UKX3 1938 aa2.87□□□□□ -1.95
SNHG1-224ENST00000545688 WDFY3Q8IZQ1 3526 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 CNOT1A5YKK6 2376 aaKnown RBP2.86□□□□□ -1.95
SNHG1-224ENST00000545688 A0A0U1RQK1 487 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 C13orf42A0A1B0GVH6 325 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 TCP11X1B4DZS4 312 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 RTN2O75298 545 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 CYP3A5P20815 502 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 STIP1P31948 543 aaKnown RBP2.86□□□□□ -1.95
SNHG1-224ENST00000545688 SERPINB6P35237 376 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 KRTAP10-10P60014 251 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 ST8SIA6P61647 398 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 DYNLL1P63167 89 aaKnown RBP2.86□□□□□ -1.95
SNHG1-224ENST00000545688 TSPY1Q01534 308 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 HERPUD1Q15011 391 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 WDR43Q15061 677 aaKnown RBP eCLIP2.86□□□□□ -1.95
SNHG1-224ENST00000545688 HKDC1Q2TB90 917 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 ANKRD20A4Q4UJ75 823 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 ANKRD20A8PQ5CZ79 823 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 ANKRD20A2Q5SQ80 823 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 SPATA46Q5T0L3 261 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 ANKRD20A1Q5TYW2 823 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 ANKRD20A3Q5VUR7 823 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 TMED8Q6PL24 325 aaPredicted RBP2.86□□□□□ -1.95
SNHG1-224ENST00000545688 TMEM179Q6ZVK1 233 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 ASRGL1Q7L266 308 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 CADM2Q8N3J6 435 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 FNDC8Q8TC99 324 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 CPXM1Q96SM3 734 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 DMXL2Q8TDJ6 3036 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 LAMA5O15230 3695 aa2.86□□□□□ -1.95
SNHG1-224ENST00000545688 NAV2Q8IVL1 2488 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 FREM2Q5SZK8 3169 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 HELZ2Q9BYK8 2649 aaKnown RBP2.85□□□□□ -1.95
SNHG1-224ENST00000545688 CEP295Q9C0D2 2601 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 SIP14410 1827 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 PARP14Q460N5 1801 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 RANBP6O60518 1105 aaKnown RBP2.85□□□□□ -1.95
SNHG1-224ENST00000545688 REC8O95072 547 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 PSG2P11465 335 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 GEMP55040 296 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 UCP2P55851 309 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 CNTN2Q02246 1040 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 GPM6BQ13491 265 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 TFDP3Q5H9I0 405 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 TMEM184AQ6ZMB5 413 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 GBP6Q6ZN66 633 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 TOP1MTQ969P6 601 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 DDX50Q9BQ39 737 aaKnown RBP2.85□□□□□ -1.95
SNHG1-224ENST00000545688 MTG1Q9BT17 334 aaPredicted RBP2.85□□□□□ -1.95
SNHG1-224ENST00000545688 ZNF350Q9GZX5 532 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 GANQ9H2C0 597 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 TSPY26PQ9H489 355 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 EHD1Q9H4M9 534 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 SLC38A10Q9HBR0 1119 aa2.85□□□□□ -1.95
SNHG1-224ENST00000545688 DDX49Q9Y6V7 483 aaKnown RBP2.85□□□□□ -1.95
SNHG1-224ENST00000545688 FOCADQ5VW36 1801 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 CDK5RAP2Q96SN8 1893 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 HAS3O00219 553 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 CA11O75493 328 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 MMP1P03956 469 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 UQCRFS1P1P0C7P4 283 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 DNAJB1P25685 340 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 RBP5P82980 135 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 EBI3Q14213 229 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 ZNF789Q5FWF6 425 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 AGBL2Q5U5Z8 902 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 VSIG1Q86XK7 387 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 UBALD2Q8IYN6 164 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 LINC01555Q8NAE3 123 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 VN1R2Q8NFZ6 395 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 RPGRIP1Q96KN7 1286 aa2.84□□□□□ -1.95
SNHG1-224ENST00000545688 RNPEPL1Q9HAU8 725 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms