RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 FN3KQ9H479 309 aa8.58□□□□□ -1.04
DDB1-211ENST00000538280 CACYBPQ9HB71 228 aaKnown RBP8.58□□□□□ -1.04
DDB1-211ENST00000538280 KRCC1Q9NPI7 259 aaPredicted RBP8.58□□□□□ -1.04
DDB1-211ENST00000538280 POLE4Q9NR33 117 aa8.58□□□□□ -1.04
DDB1-211ENST00000538280 NLGN3Q9NZ94 848 aa8.58□□□□□ -1.04
DDB1-211ENST00000538280 SLC7A7Q9UM01 511 aa8.58□□□□□ -1.04
DDB1-211ENST00000538280 CARD8Q9Y2G2 431 aa8.58□□□□□ -1.04
DDB1-211ENST00000538280 V9GYH0 126 aa8.58□□□□□ -1.04
DDB1-211ENST00000538280 SPACA6W5XKT8 324 aa8.58□□□□□ -1.04
DDB1-211ENST00000538280 IGF2RP11717 2491 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 TRDV1A0A1B0GX56 115 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 OR5K3A6NET4 321 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 UNC119BA6NIH7 251 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 C1QTNF9BB2RNN3 333 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 CDC42EP2O14613 210 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 BRINP1O60477 761 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 SOX30O94993 753 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 CBX7O95931 251 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 CT62P0C5K7 136 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 MSL3P1P0C860 447 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 C1QTNF9P0C862 333 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 IMPDH2P12268 514 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 PVRP15151 417 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 SPNP16150 400 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 TBXA2RP21731 343 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 GABRA5P31644 462 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 NUDT1P36639 197 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 GPR4P46093 362 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 RPS25P62851 125 aaKnown RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 POU6F2P78424 691 aaPredicted RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 IGLV3-21P80748 117 aaPredicted RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 SHC2P98077 582 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 HOXC5Q00444 222 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 BDH1Q02338 343 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 SLC13A2Q13183 592 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 KRR1Q13601 381 aaKnown RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 COL9A2Q14055 689 aaPredicted RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 TCEA2Q15560 299 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 SPANXN2Q5MJ10 180 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 CCNJQ5T5M9 372 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 OR2G6Q5TZ20 316 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 GARNL3Q5VVW2 1013 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 LIPKQ5VXJ0 399 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 SLC30A6Q6NXT4 461 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 HSDL2Q6YN16 418 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 WDR88Q6ZMY6 472 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 TMPRSS11FQ6ZWK6 438 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 RRM2BQ7LG56 351 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 LAPTM4BQ86VI4 370 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 WDR5BQ86VZ2 330 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 GRAMD2AQ8IUY3 354 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 CSNK1A1LQ8N752 337 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 POC5Q8NA72 575 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 OR2T33Q8NG76 320 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 OR10G6Q8NH81 332 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 SETD6Q8TBK2 473 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 UFD1Q92890 307 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 RERGQ96A58 199 aaPredicted RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 COL26A1Q96A83 441 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 COQ7Q99807 217 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 KCNS3Q9BQ31 491 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 IER2Q9BTL4 223 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 MIXL1Q9H2W2 232 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 TCEAL2Q9H3H9 227 aaPredicted RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 EXOSC4Q9NPD3 245 aaKnown RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 HINT3Q9NQE9 182 aaKnown RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 C14orf105Q9NVL8 296 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 CHCHD3Q9NX63 227 aaKnown RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 PLEKHB1Q9UF11 243 aaPredicted RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 POMT2Q9UKY4 750 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 CBLCQ9ULV8 474 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 TMEM5Q9Y2B1 443 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 GPR52Q9Y2T5 361 aa8.57□□□□□ -1.04
DDB1-211ENST00000538280 SPIN1Q9Y657 262 aaPredicted RBP8.57□□□□□ -1.04
DDB1-211ENST00000538280 SPTY2D1-AS1A0A0U1RR47 76 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 ZNF860A6NHJ4 632 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 BHLHE40O14503 412 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 PLD2O14939 933 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 SEC14L5O43304 696 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 COQ9O75208 318 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 CDRT1O95170 752 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 LALBAP00709 142 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 CELA2BP08218 269 aaPredicted RBP8.56□□□□□ -1.04
DDB1-211ENST00000538280 TSPAN19P0C672 248 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 SLC35E2P0CK97 266 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 PRG2P13727 222 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 S1PR1P21453 382 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 NT5EP21589 574 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 DRD5P21918 477 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 GALP22466 123 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 CD79BP40259 229 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 SLC9A3P48764 834 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 DSG2Q14126 1118 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 FZD2Q14332 565 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 OR1Q1Q15612 314 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 GPR68Q15743 365 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 ZNF79Q15937 498 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 PRTGQ2VWP7 1150 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 ARMC4Q5T2S8 1044 aa8.56□□□□□ -1.04
DDB1-211ENST00000538280 MRPL2Q5T653 305 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms