RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 PHOSPHO1Q8TCT1 267 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 SLC35B4Q969S0 331 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 SLC41A3Q96GZ6 507 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 MBOAT4Q96T53 435 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 FAM117AQ9C073 453 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 FBXL4Q9UKA2 621 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 SH3PXD2BA1X283 911 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 ARRDC5A6NEK1 342 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 OR2J2O76002 312 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 NGFRP08138 427 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 ACAA2P42765 397 aaKnown RBP26.47■■□□□ 1.83
VEGFA-211ENST00000476772 RAD23AP54725 363 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 MED21Q13503 144 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 TRAM2Q15035 370 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 ZNF770Q6IQ21 691 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-211ENST00000476772 ZNF550Q7Z398 422 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 IL22RA1Q8N6P7 574 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 POGLUT1Q8NBL1 392 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 FAM71CQ8NEG0 241 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 NACC2Q96BF6 587 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 ZNF559Q9BR84 538 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 RTN4RQ9BZR6 473 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 POLR2J2Q9GZM3 115 aaKnown RBP26.47■■□□□ 1.83
VEGFA-211ENST00000476772 POLR2J3Q9H1A7 115 aaKnown RBP26.47■■□□□ 1.83
VEGFA-211ENST00000476772 KRT84Q9NSB2 600 aa26.47■■□□□ 1.83
VEGFA-211ENST00000476772 UBL4AP11441 157 aa26.46■■□□□ 1.83
VEGFA-211ENST00000476772 ANXA8P13928 327 aa26.46■■□□□ 1.83
VEGFA-211ENST00000476772 FBXW4P57775 412 aa26.46■■□□□ 1.83
VEGFA-211ENST00000476772 EFR3AQ14156 821 aa26.46■■□□□ 1.83
VEGFA-211ENST00000476772 SLC36A3Q495N2 470 aa26.46■■□□□ 1.83
VEGFA-211ENST00000476772 DTX1Q86Y01 620 aa26.46■■□□□ 1.83
VEGFA-211ENST00000476772 OR5M3Q8NGP4 307 aa26.46■■□□□ 1.83
VEGFA-211ENST00000476772 SLC22A8Q8TCC7 542 aa26.46■■□□□ 1.83
VEGFA-211ENST00000476772 CNBD2Q96M20 576 aa26.46■■□□□ 1.83
VEGFA-211ENST00000476772 P4HTMQ9NXG6 502 aa26.46■■□□□ 1.83
VEGFA-211ENST00000476772 IL17BQ9UHF5 180 aa26.46■■□□□ 1.83
VEGFA-211ENST00000476772 OIP5O43482 229 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 HPP00738 406 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 CAPGP40121 348 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 RFX4Q33E94 735 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 IGF2-ASQ6U949 168 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 LYPD8Q6UX82 237 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 MRGPREQ86SM8 312 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 CHERPQ8IWX8 916 aaKnown RBP26.45■■□□□ 1.82
VEGFA-211ENST00000476772 AQP11Q8NBQ7 271 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 NIPSNAP1Q9BPW8 284 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 ANKRD19PQ9H560 264 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 SLC7A7Q9UM01 511 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 CEP250Q9BV73 2442 aa26.45■■□□□ 1.82
VEGFA-211ENST00000476772 A0A1W2PQD3 144 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 TRAPPC13A5PLN9 417 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 ALG1L2C9J202 215 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 OR10H3O60404 316 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 NTN1O95631 604 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 RPSAP08865 295 aaKnown RBP26.44■■□□□ 1.82
VEGFA-211ENST00000476772 CBLP22681 906 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 EVI2BP34910 448 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 ADARB1P78563 741 aaKnown RBP26.44■■□□□ 1.82
VEGFA-211ENST00000476772 KCNAB2Q13303 367 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 MARCH3Q86UD3 253 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 NKAIN4Q8IVV8 208 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 RASL10BQ96S79 203 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 TBL1XR1Q9BZK7 514 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 H3BNH8 94 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 FADS1O60427 444 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 ITGAMP11215 1152 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 NAGAP17050 411 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 RYKP34925 604 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 EPS8Q12929 822 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 SKP2Q13309 424 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 HGDQ93099 445 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 SLC38A4Q969I6 547 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 NODALQ96S42 347 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 TMEM27Q9HBJ8 222 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 CARD8Q9Y2G2 431 aa26.44■■□□□ 1.82
VEGFA-211ENST00000476772 A0A087WUU8 490 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 GTPBP1O00178 669 aaKnown RBP26.43■■□□□ 1.82
VEGFA-211ENST00000476772 ZNF264O43296 627 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 GASTP01350 101 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 GNAO1P09471 354 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 POU2F1P14859 743 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 LSM11P83369 360 aaKnown RBP eCLIP26.43■■□□□ 1.822e-28■□□□□ 10.3
VEGFA-211ENST00000476772 Q0VFX4 171 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 TGIF1Q15583 401 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 RAB43Q86YS6 212 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 ZNF440Q8IYI8 595 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 MARVELD2Q8N4S9 558 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 OR4K5Q8NGD3 323 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 GTPBP3Q969Y2 492 aaKnown RBP26.43■■□□□ 1.82
VEGFA-211ENST00000476772 ANKRD60Q9BZ19 345 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 RIBC2Q9H4K1 309 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 FAM118AQ9NWS6 357 aa26.43■■□□□ 1.82
VEGFA-211ENST00000476772 ITGA10O75578 1167 aa26.42■■□□□ 1.82
VEGFA-211ENST00000476772 LYPD3O95274 346 aa26.42■■□□□ 1.82
VEGFA-211ENST00000476772 CLIC3O95833 236 aa26.42■■□□□ 1.82
VEGFA-211ENST00000476772 POLR2IP36954 125 aaKnown RBP26.42■■□□□ 1.82
VEGFA-211ENST00000476772 TMED10P49755 219 aaKnown RBP26.42■■□□□ 1.82
VEGFA-211ENST00000476772 RSPO4Q2I0M5 234 aaPredicted RBP26.42■■□□□ 1.82
VEGFA-211ENST00000476772 FCRLBQ6BAA4 426 aa26.42■■□□□ 1.82
VEGFA-211ENST00000476772 PGBD2Q6P3X8 592 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms