RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TNK1Q13470 666 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 NOXRED1Q6NXP6 359 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 ZNF551Q7Z340 670 aaPredicted RBP17.67■□□□□ 0.42
VARS-221ENST00000463184 GALNT10Q86SR1 603 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 CDRT4Q8N9R6 151 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 OR4C3Q8NH37 302 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 OR2V1Q8NHB1 315 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 CEP70Q8NHQ1 597 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 SLC9A6Q92581 669 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 AKAP1Q92667 903 aaKnown RBP eCLIP17.67■□□□□ 0.42
VARS-221ENST00000463184 METTL2AQ96IZ6 378 aaKnown RBP17.67■□□□□ 0.42
VARS-221ENST00000463184 HDHD5Q9BXW7 423 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 TNFRSF12AQ9NP84 129 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 EQTNQ9NQ60 294 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 LAMP3Q9UQV4 416 aa17.67■□□□□ 0.42
VARS-221ENST00000463184 RTTNQ86VV8 2226 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 A0A1W2PRB8 838 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 TNFSF11O14788 317 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 SNUPNO95149 360 aaKnown RBP17.66■□□□□ 0.42
VARS-221ENST00000463184 OXSR1O95747 527 aaPredicted RBP17.66■□□□□ 0.42
VARS-221ENST00000463184 ME2P23368 584 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 PSMA4P25789 261 aaKnown RBP17.66■□□□□ 0.42
VARS-221ENST00000463184 GPC1P35052 558 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 ZNF41P51814 821 aaPredicted RBP17.66■□□□□ 0.42
VARS-221ENST00000463184 RPS4XP62701 263 aaKnown RBP17.66■□□□□ 0.42
VARS-221ENST00000463184 HSPB3Q12988 150 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 ETFDHQ16134 617 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 HBMQ6B0K9 141 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 ADAM5Q6NVV9 412 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 STEAP2Q8NFT2 490 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 RNF145Q96MT1 663 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 TACO1Q9BSH4 297 aaKnown RBP17.66■□□□□ 0.42
VARS-221ENST00000463184 MED17Q9NVC6 651 aa17.66■□□□□ 0.42
VARS-221ENST00000463184 A0A0J9YW62 118 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 PDPK1O15530 556 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 HSPA4LO95757 839 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 OPN1LWP04000 364 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 PABPC4LP0CB38 370 aaKnown RBP17.65■□□□□ 0.42
VARS-221ENST00000463184 AGTR1P30556 359 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 LCN1P31025 176 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 ARRB2P32121 409 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 ABCE1P61221 599 aaKnown RBP17.65■□□□□ 0.42
VARS-221ENST00000463184 STX3Q13277 289 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 PLPPR5Q32ZL2 321 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 CLEC6AQ6EIG7 209 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 MFSD12Q6NUT3 480 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 MISPQ8IVT2 679 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 RAB3IL1Q8TBN0 382 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 FAM110BQ8TC76 370 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 OSTF1Q92882 214 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 TRMT61AQ96FX7 289 aaKnown RBP17.65■□□□□ 0.42
VARS-221ENST00000463184 ZNF764Q96H86 408 aaPredicted RBP17.65■□□□□ 0.42
VARS-221ENST00000463184 EGLN2Q96KS0 407 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 NPAS1Q99742 590 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 C12orf49Q9H741 205 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 NTMQ9P121 344 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 TRAF6Q9Y4K3 522 aa17.65■□□□□ 0.42
VARS-221ENST00000463184 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 ITM2AO43736 263 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 SEC22BO75396 215 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 CHEK2O96017 543 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 HPGDP15428 266 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 SLC1A6P48664 564 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 PRKAG1P54619 331 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 CARD18P57730 90 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 KRTAP1-1Q07627 177 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 KIAA0040Q15053 153 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 CLEC12BQ2HXU8 276 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 KANK2Q63ZY3 851 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 HEPHL1Q6MZM0 1159 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 RNF165Q6ZSG1 346 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 GATSQ8NAP1 163 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 NUP43Q8NFH3 380 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 ZFP28Q8NHY6 868 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 GIMAP5Q96F15 307 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 REXO5Q96IC2 774 aaKnown RBP17.64■□□□□ 0.41
VARS-221ENST00000463184 UBQLN4Q9NRR5 601 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.64■□□□□ 0.41
VARS-221ENST00000463184 SNX8Q9Y5X2 465 aa17.64■□□□□ 0.41
VARS-221ENST00000463184 FBN1P35555 2871 aaKnown RBP17.64■□□□□ 0.41
VARS-221ENST00000463184 OVOL3O00110 214 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 DYNC1I1O14576 645 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 LYPLA1O75608 230 aaPredicted RBP17.63■□□□□ 0.41
VARS-221ENST00000463184 KCNK2O95069 426 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 NID1P14543 1247 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 PRPH2P23942 346 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 IDUAP35475 653 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 EIF1P41567 113 aaKnown RBP17.63■□□□□ 0.41
VARS-221ENST00000463184 BST1Q10588 318 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 VEZF1Q14119 521 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 HSP90B2PQ58FF3 399 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 TMEM201Q5SNT2 666 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 ATG16L1Q676U5 607 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 ZCCHC12Q6PEW1 402 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 FIGNL1Q6PIW4 674 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 LILRA2Q8N149 483 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 POC1BQ8TC44 478 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 FBXW5Q969U6 566 aa17.63■□□□□ 0.41
VARS-221ENST00000463184 CIDECQ96AQ7 238 aaPredicted RBP17.63■□□□□ 0.41
VARS-221ENST00000463184 S100PBPQ96BU1 408 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms