RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MIOSQ9NXC5 875 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 USE1Q9NZ43 259 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 PTTG2Q9NZH5 202 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 CD274Q9NZQ7 290 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF282Q9UDV7 671 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-205ENST00000424674 CLEC2DQ9UHP7 191 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 PILRAQ9UKJ1 303 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 POLDIP2Q9Y2S7 368 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 YIPF1Q9Y548 306 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 FADS3Q9Y5Q0 445 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 COLEC10Q9Y6Z7 277 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 URGCP-MRPS24S4R325 110 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 AFF2P51816 1311 aa3.32□□□□□ -1.88
SF3B1-205ENST00000424674 FHOD3Q2V2M9 1422 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 PTPRUQ92729 1446 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 RPAP1Q9BWH6 1393 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 SH3PXD2BA1X283 911 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF99A8MXY4 864 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 PRR32B1ATL7 298 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 B4DGG1 531 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 LRRN3E7EW58 273 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 MKRN2OSH3BPM6 223 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 KLRC4-KLRK1H3BQV0 150 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 M0R3G1 203 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CFLARO15519 480 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 UGDHO60701 494 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 HUS1O60921 280 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 PRKRAO75569 313 aaKnown RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 TMEM50AO95807 157 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CRYABP02511 175 aaKnown RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 ALDOBP05062 364 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 GPIP06744 558 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 GSTA1P08263 222 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 H2BFMP0C1H6 154 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 GOLGA8HP0CJ92 632 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 MYL2P10916 166 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 PSKH1P11801 424 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF26P17031 533 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 PGCP20142 388 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 PMCHP20382 165 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 SYT1P21579 422 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 GJB2P29033 226 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 TACR3P29371 465 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CFHR2P36980 270 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 PGGT1BP53609 377 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CLDN20P56880 219 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 AP3S2P59780 193 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 ERVK-25P63136 954 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 TUBA4AP68366 448 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 PITX1P78337 314 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 S100A12P80511 92 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 PITPNAQ00169 270 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 MED21Q13503 144 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 GPR50Q13585 617 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 KLF9Q13886 244 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CEACAM7Q14002 265 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CAPRIN1Q14444 709 aaKnown RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 SLC17A1Q14916 467 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 QRICH1Q2TAL8 776 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 RAB6CQ53S08 254 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 COQ5Q5HYK3 327 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 TCHHL1Q5QJ38 904 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 DDI2Q5TDH0 399 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 C9orf135Q5VTT2 229 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 AGAP7PQ5VUJ5 663 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 KHDRBS2Q5VWX1 349 aaKnown RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 MORN5Q5VZ52 161 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF66Q6ZN08 573 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 SLC16A14Q7RTX9 510 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 TFAP2DQ7Z6R9 452 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF546Q86UE3 836 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 C17orf64Q86WR6 236 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 RNF130Q86XS8 419 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CRLF3Q8IUI8 442 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 APRG1Q8IVJ8 170 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CLEC4FQ8N1N0 589 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 SYS1Q8N2H4 156 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 JAGN1Q8N5M9 183 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 HORMAD2Q8N7B1 307 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 LRRC57Q8N9N7 239 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 Q8N9P0 234 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CCDC197Q8NCU1 140 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 SDR9C7Q8NEX9 313 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 OR1L6Q8NGR2 347 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 NUBPLQ8TB37 319 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 ARRDC2Q8TBH0 407 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 RNF128Q8TEB7 428 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 LRRC15Q8TF66 581 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 ZNF419Q96HQ0 510 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 CELF6Q96J87 481 aaKnown RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 AGAP4Q96P64 663 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 FCRL5Q96RD9 977 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 RAB6CQ9H0N0 254 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 FAM234AQ9H0X4 552 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 SLITRK2Q9H156 845 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 ANKRD19PQ9H560 264 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 VCX3AQ9NNX9 186 aa3.31□□□□□ -1.88
SF3B1-205ENST00000424674 PNRC2Q9NPJ4 139 aaKnown RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 IMP3Q9NV31 184 aaKnown RBP3.31□□□□□ -1.88
SF3B1-205ENST00000424674 RNF186Q9NXI6 227 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms