RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GFERP55789 205 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 WNT4P56705 351 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 CLEC12AQ5QGZ9 265 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 ARMC4Q5T2S8 1044 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 GID4Q8IVV7 300 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 JAM3Q9BX67 310 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 DUSP15Q9H1R2 295 aaPredicted RBP21.37■■□□□ 1.01
VPS16-201ENST00000380443 BAIAP2Q9UQB8 552 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 EXOGQ9Y2C4 368 aaKnown RBP21.37■■□□□ 1.01
VPS16-201ENST00000380443 PEX16Q9Y5Y5 336 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 SCN2AQ99250 2005 aa21.37■■□□□ 1.01
VPS16-201ENST00000380443 NPIPA5A0A0B4J1W7 369 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 A0A0B4J2E0 115 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 A0A1B0GX12 115 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 NPIPA7E9PJI5 369 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 NPIPB9F8W1W9 429 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 KPNA4O00629 521 aaPredicted RBP21.36■■□□□ 1.01
VPS16-201ENST00000380443 NPIPA8P0DM63 369 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 BMP4P12644 408 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 IFI30P13284 250 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 CPEP16870 476 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 HTR1FP30939 366 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 AFF3P51826 1226 aaKnown RBP21.36■■□□□ 1.01
VPS16-201ENST00000380443 BNC1Q01954 994 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 ITGADQ13349 1161 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 FGFBP1Q14512 234 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 PDZK1Q5T2W1 519 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 SLC30A6Q6NXT4 461 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 MEX3DQ86XN8 651 aaKnown RBP21.36■■□□□ 1.01
VPS16-201ENST00000380443 PLXDC1Q8IUK5 500 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 OR1F2PQ96R84 312 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 RBCK1Q9BYM8 510 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 OR10A5Q9H207 317 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 UBQLN3Q9H347 655 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 ETAA1Q9NY74 926 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 SEMA5BQ9P283 1151 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 LRIT1Q9P2V4 623 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 GMEB2Q9UKD1 530 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 DSCR3O14972 297 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 HBQ1P09105 142 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 CD1CP29017 333 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 SSTR4P31391 388 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 S100A5P33763 92 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 TGFBR1P36897 503 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 PPP5CP53041 499 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 HSD11B2P80365 405 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 MAT1AQ00266 395 aaKnown RBP21.36■■□□□ 1.01
VPS16-201ENST00000380443 DSG2Q14126 1118 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.36■■□□□ 1.01
VPS16-201ENST00000380443 DCDC5Q6ZRR9 648 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 B4GALNT2Q8NHY0 566 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 CNOT9Q92600 299 aaKnown RBP21.36■■□□□ 1.01
VPS16-201ENST00000380443 SAMD8Q96LT4 415 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 IER2Q9BTL4 223 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 SPRTNQ9H040 489 aaPredicted RBP21.36■■□□□ 1.01
VPS16-201ENST00000380443 OR52D1Q9H346 318 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 DNAJB12Q9NXW2 375 aaKnown RBP21.36■■□□□ 1.01
VPS16-201ENST00000380443 KLHL3Q9UH77 587 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 SSR3Q9UNL2 185 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 RNF215Q9Y6U7 377 aa21.36■■□□□ 1.01
VPS16-201ENST00000380443 ANKRD33BA6NCL7 494 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 SAGE2PA6NJ88 616 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 EFCAB7A8K855 629 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 CDC42EP2O14613 210 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 PFDN1O60925 122 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 ETV5P41161 510 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 GCGRP47871 477 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 CXCL12P48061 93 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 ETV1P50549 477 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 BTG2P78543 158 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 GPLD1P80108 840 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 ZAR1Q86SH2 424 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 ZNF440Q8IYI8 595 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 LNX2Q8N448 690 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 FANK1Q8TC84 345 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 CDADC1Q9BWV3 514 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 HOXD1Q9GZZ0 328 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 CBLCQ9ULV8 474 aa21.35■■□□□ 1.01
VPS16-201ENST00000380443 A0A075B6Q4 140 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 HTR3EA5X5Y0 456 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 BCAT2O15382 392 aaPredicted RBP21.34■■□□□ 1.01
VPS16-201ENST00000380443 DUX1O43812 170 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 HCN1O60741 890 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 GPX5O75715 221 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 MSL3P1P0C860 447 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 ACAA2P42765 397 aaKnown RBP21.34■■□□□ 1.01
VPS16-201ENST00000380443 CSNK1EP49674 416 aaKnown RBP21.34■■□□□ 1.01
VPS16-201ENST00000380443 ARL4DP49703 201 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 ZNF45Q02386 682 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 YOD1Q5VVQ6 348 aaPredicted RBP21.34■■□□□ 1.01
VPS16-201ENST00000380443 WDR88Q6ZMY6 472 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 KMT5CQ86Y97 462 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 PHC2Q8IXK0 858 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 ZNF615Q8N8J6 731 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 RCBTB1Q8NDN9 531 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 PSD4Q8NDX1 1056 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 BPIFA2Q96DR5 249 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 CCNL2Q96S94 520 aaPredicted RBP21.34■■□□□ 1.01
VPS16-201ENST00000380443 ZNF426Q9BUY5 554 aa21.34■■□□□ 1.01
VPS16-201ENST00000380443 CUTCQ9NTM9 273 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms