RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 SOX14O95416 240 aa21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 KRT20P35900 424 aa21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 NR0B1P51843 470 aaKnown RBP21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 SLCO6A1Q86UG4 719 aa21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 SPARTQ8N0X7 666 aa21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 WDR36Q8NI36 951 aaKnown RBP21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 NODALQ96S42 347 aa21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 CRB3Q9BUF7 120 aa21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 RBM38Q9H0Z9 239 aaKnown RBP21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 SLC25A19Q9HC21 320 aa21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 C11orf16Q9NQ32 467 aa21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 TMEM9BQ9NQ34 198 aa21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 EXOSC3Q9NQT5 275 aaKnown RBP21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 PAK1IP1Q9NWT1 392 aaPredicted RBP21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 ZNF223Q9UK11 482 aaPredicted RBP21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 SNX5Q9Y5X3 404 aa21.02■□□□□ 0.96
SCAMP3-202ENST00000355379 SCDO00767 359 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 GDF9O60383 454 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 FAM20BO75063 409 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 NGFRP08138 427 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 HTR1AP08908 422 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 SNRPGP62308 76 aaKnown RBP21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 CDK5Q00535 292 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 CPEB2Q7Z5Q1 589 aaKnown RBP21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 NRMQ8IXM6 262 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 SUMF1Q8NBK3 374 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 TMEM239Q8WW34 195 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 DGCR14Q96DF8 476 aaKnown RBP21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 FAM46AQ96IP4 442 aaKnown RBP21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 MPP4Q96JB8 637 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 CDC6Q99741 560 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 TUBA1CQ9BQE3 449 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 STRADBQ9C0K7 418 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 FLRT3Q9NZU0 649 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 PCDHGB1Q9Y5G3 927 aa21.01■□□□□ 0.95
SCAMP3-202ENST00000355379 A0A1B0GWA3 101 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 SH3D21A4FU49 640 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 PRKNO60260 465 aaPredicted RBP21■□□□□ 0.95
SCAMP3-202ENST00000355379 IGFBP1P08833 259 aaPredicted RBP21■□□□□ 0.95
SCAMP3-202ENST00000355379 HPGDP15428 266 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 TTKP33981 857 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 RBM34P42696 430 aaKnown RBP21■□□□□ 0.95
SCAMP3-202ENST00000355379 PNLIPRP2P54317 469 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 FOXL2P58012 376 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 RNF4P78317 190 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 PRKCDQ05655 676 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 ZBED5Q49AG3 693 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 PAPD4Q6PIY7 484 aaKnown RBP21■□□□□ 0.95
SCAMP3-202ENST00000355379 KIF18BQ86Y91 864 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 CCDC103Q8IW40 242 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 CLDN22Q8N7P3 220 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 POGLUT1Q8NBL1 392 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 APCDD1LQ8NCL9 501 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 VMP1Q96GC9 406 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 WDR77Q9BQA1 342 aaPredicted RBP21■□□□□ 0.95
SCAMP3-202ENST00000355379 EDEM2Q9BV94 578 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 POLR1BQ9H9Y6 1135 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 TMEM5Q9Y2B1 443 aa21■□□□□ 0.95
SCAMP3-202ENST00000355379 IGHV3-20A0A0C4DH32 117 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 A0A1W2PQD3 144 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 PTGES3LE9PB15 166 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 ADAM11O75078 769 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 REM1O75628 298 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 OR6B1O95007 311 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 IL12BP29460 328 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 RAB15P59190 212 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 PLCXD2Q0VAA5 305 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 SMN1Q16637 294 aaKnown RBP20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 CASP12Q6UXS9 341 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 WDR88Q6ZMY6 472 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 ZNF517Q6ZMY9 492 aaPredicted RBP20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 PTCHD4Q6ZW05 846 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 GPR141Q7Z602 305 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 OR8K3Q8NH51 312 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 NUBPLQ8TB37 319 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 SGCDQ92629 289 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 LPAR4Q99677 370 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 NTN1O95631 604 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 UBL4AP11441 157 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 ENDOUP21128 410 aaKnown RBP20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 GIPRP48546 466 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 SMSP52788 366 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 CTBP2P56545 445 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 TMEM201Q5SNT2 666 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 ULK3Q6PHR2 472 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 LINC00114Q6XXX2 140 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 HSDL2Q6YN16 418 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 ZNF540Q8NDQ6 660 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 TEX47Q8TBZ9 253 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 OSTF1Q92882 214 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 TMIGD2Q96BF3 282 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 OMA1Q96E52 524 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 CCNL2Q96S94 520 aaPredicted RBP20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 ADOQ96SZ5 270 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 ZPBPQ9BS86 351 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 ZNF426Q9BUY5 554 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 ULBP3Q9BZM4 244 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 NRSN2Q9GZP1 204 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 CLN6Q9NWW5 311 aa20.99■□□□□ 0.95
SCAMP3-202ENST00000355379 CNIH4Q9P003 139 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms