RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 OR7D2Q96RA2 312 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 B3GNT4Q9C0J1 378 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 SPNS1Q9H2V7 528 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 HS3ST2Q9Y278 367 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 CHST2Q9Y4C5 530 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 TRABD2BA6NFA1 517 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 PSMB1P20618 241 aaKnown RBP12.6□□□□□ -0.39
SEC23A-201ENST00000307712 IL32P24001 234 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 GABRA3P34903 492 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 DGCR2P98153 550 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 RAB33AQ14088 237 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 CD276Q5ZPR3 534 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 HAGHLQ6PII5 290 aaPredicted RBP12.6□□□□□ -0.39
SEC23A-201ENST00000307712 ABI3BPQ7Z7G0 1075 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 TMEM239Q8WW34 195 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 ARHGAP9Q9BRR9 750 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 ACTRT3Q9BYD9 372 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 HINT3Q9NQE9 182 aaKnown RBP12.6□□□□□ -0.39
SEC23A-201ENST00000307712 ACSS1Q9NUB1 689 aaPredicted RBP12.6□□□□□ -0.39
SEC23A-201ENST00000307712 HPF1Q9NWY4 346 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 NTNG1Q9Y2I2 539 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 CCDC88CQ9P219 2028 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 XKRYO14609 159 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 MAS1P04201 325 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 UCHL1P09936 223 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 GABRB1P18505 474 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 AHCYP23526 432 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 NUDT1P36639 197 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 VITQ6UXI7 678 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 RPTNQ6XPR3 784 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.6□□□□□ -0.394e-22■■■■■ 138.8
SEC23A-201ENST00000307712 PARS2Q7L3T8 475 aaKnown RBP12.6□□□□□ -0.39
SEC23A-201ENST00000307712 POMGNT2Q8NAT1 580 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 INO80EQ8NBZ0 244 aaPredicted RBP12.6□□□□□ -0.39
SEC23A-201ENST00000307712 C15orf40Q8WUR7 153 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 CNOT9Q92600 299 aaKnown RBP12.6□□□□□ -0.39
SEC23A-201ENST00000307712 TRIM43Q96BQ3 446 aaPredicted RBP12.6□□□□□ -0.39
SEC23A-201ENST00000307712 ATF6BQ99941 703 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 SEC22CQ9BRL7 303 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 C1QTNF2Q9BXJ5 285 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 C14orf105Q9NVL8 296 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 RBBP6Q7Z6E9 1792 aaKnown RBP12.6□□□□□ -0.39
SEC23A-201ENST00000307712 ADAMTS4O75173 837 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 INHAP05111 366 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 CTNNB1P35222 781 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 MAP3K8P41279 467 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 HMGA2P52926 109 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 CLDN2P57739 230 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 RNF165Q6ZSG1 346 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 HTR3DQ70Z44 454 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 CASTOR1Q8WTX7 329 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 TMEM255BQ8WV15 326 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 DNAJA3Q96EY1 480 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 SFXN2Q96NB2 322 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 SLC46A2Q9BY10 475 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 NDOR1Q9UHB4 597 aa12.6□□□□□ -0.39
SEC23A-201ENST00000307712 UBL3O95164 117 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 EIF4EP06730 217 aaKnown RBP12.59□□□□□ -0.39
SEC23A-201ENST00000307712 FBXO45P0C2W1 286 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 ADH5P11766 374 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 EPCAMP16422 314 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 HTR1FP30939 366 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 PGDP52209 483 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 ART1P52961 327 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 PER3P56645 1201 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 C12orf73Q69YU5 71 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 TEX261Q6UWH6 196 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 FCRLAQ7L513 359 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 SDR9C7Q8NEX9 313 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 GPR32P1Q8NGA4 272 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 OR52N1Q8NH53 320 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 SAMD11Q96NU1 681 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 CNN2Q99439 309 aaKnown RBP12.59□□□□□ -0.39
SEC23A-201ENST00000307712 RAB11FIP5Q9BXF6 653 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 UBQLN3Q9H347 655 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 SRA1Q9HD15 236 aaKnown RBP12.59□□□□□ -0.39
SEC23A-201ENST00000307712 PLCL2Q9UPR0 1127 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 U3KQ87 197 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 A0A0B4J203 849 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 SLC5A10A0PJK1 596 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 MEIS3P1A6NDR6 274 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 F5H0A9 414 aaPredicted RBP12.59□□□□□ -0.39
SEC23A-201ENST00000307712 GOSR2O14653 212 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 VEGFDO43915 354 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 PRAF2O60831 178 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 LGI1O95970 557 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 SOD1P00441 154 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 CD2P06729 351 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 POLR2CP19387 275 aaPredicted RBP12.59□□□□□ -0.39
SEC23A-201ENST00000307712 ARL4DP49703 201 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 TPRA1Q86W33 373 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 ZNF227Q86WZ6 799 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 LRRC25Q8N386 305 aaPredicted RBP12.59□□□□□ -0.39
SEC23A-201ENST00000307712 LGALS14Q8TCE9 139 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 PXYLP1Q8TE99 480 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 NSMAFQ92636 917 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 CDS1Q92903 461 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 MS4A8Q9BY19 250 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 MFFQ9GZY8 342 aa12.59□□□□□ -0.39
SEC23A-201ENST00000307712 CHST8Q9H2A9 424 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms