RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ENPP1P22413 925 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 IL32P24001 234 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 GABRB3P28472 473 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 TTKP33981 857 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 GDF5P43026 501 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 NR4A2P43354 598 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 SLC6A8P48029 635 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 PDLIM4P50479 330 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 ARFIP1P53367 373 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CDH11P55287 796 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 TPD52P55327 224 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CLDN20P56880 219 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 C21orf58P58505 322 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CD69Q07108 199 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 BSPH1Q075Z2 132 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 SCGB2A2Q13296 93 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 SNX1Q13596 522 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 EFR3AQ14156 821 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 DOC2AQ14183 400 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 GGTLC2Q14390 218 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 GANABQ14697 944 aaKnown RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 TAB1Q15750 504 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 TBCCQ15814 346 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 SGCBQ16585 318 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CCNG2Q16589 344 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 MIDNQ504T8 468 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 ZMAT1Q5H9K5 638 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 TOR2AQ5JU69 321 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 RBM20Q5T481 1227 aaKnown RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 DEPDC1Q5TB30 811 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 KHDRBS2Q5VWX1 349 aaKnown RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 RAET1LQ5VY80 246 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 DEF8Q6ZN54 512 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 SSX8Q7RTT4 187 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 VSTM4Q8IW00 320 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 SYCE1Q8N0S2 351 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 GABRG1Q8N1C3 465 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 NKAPQ8N5F7 415 aaKnown RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CDYL2Q8N8U2 506 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 OR4K17Q8NGC6 315 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF473Q8WTR7 871 aaKnown RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 FAM216AQ8WUB2 273 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 RNF138Q8WVD3 245 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CFHR4Q92496 578 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 UBE2E3Q969T4 207 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 RGMAQ96B86 450 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CMTM7Q96FZ5 175 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 COL21A1Q96P44 957 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CENPKQ9BS16 269 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 PIMREGQ9BSJ6 248 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 LRRC1Q9BTT6 524 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 POTEKPQ9BYX7 375 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 PRRG4Q9BZD6 226 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 MEGF9Q9H1U4 602 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 OR10A2Q9H208 303 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CNOT10Q9H9A5 744 aaKnown RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 WDR41Q9HAD4 459 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 XAB2Q9HCS7 855 aaKnown RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 IARS2Q9NSE4 1012 aaKnown RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 LYARQ9NX58 379 aaKnown RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 PAQR5Q9NXK6 330 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 MOCS1Q9NZB8 636 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 PPP4R1LQ9P1A2 415 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 XPR1Q9UBH6 696 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 IKZF3Q9UKT9 509 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CORO1CQ9ULV4 474 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CLEC4AQ9UMR7 237 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 VWA7Q9Y334 891 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF337Q9Y3M9 751 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 OARD1Q9Y530 152 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 ASB4Q9Y574 426 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 AP4B1Q9Y6B7 739 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 CADP27708 2225 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 MED12LQ86YW9 2145 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 RYR2Q92736 4967 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 EML6Q6ZMW3 1958 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 NCKAP5O14513 1909 aa4.07□□□□□ -1.76
SNHG1-214ENST00000540865 PRR14LQ5THK1 2151 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 IGHV4-61A0A0C4DH41 118 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 A0A1W2PR48 441 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 OR2M5A3KFT3 312 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 GLOD5A6NK44 160 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 WASHC1A8K0Z3 465 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 B4DXG7 233 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 E7EQL1 145 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 SAP18O00422 153 aaKnown RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 SMAD9O15198 467 aaKnown RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 PRKRAO75569 313 aaKnown RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 TUBBP07437 444 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 OSMP13725 252 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 ZNF23P17027 643 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 HK1P19367 917 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 PTNP21246 168 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 NT5EP21589 574 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 PCMT1P22061 227 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 TCEA1P23193 301 aaKnown RBP4.06□□□□□ -1.76
SNHG1-214ENST00000540865 PIK3R1P27986 724 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 GGT5P36269 586 aa4.06□□□□□ -1.76
SNHG1-214ENST00000540865 PPICP45877 212 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms