RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 Q6ZRG5 221 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 Q7L0L9 218 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 EIF3MQ7L2H7 374 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 P4HA3Q7Z4N8 544 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 LUZP2Q86TE4 346 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 VPS36Q86VN1 386 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 GPC2Q8N158 579 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 CLEC4FQ8N1N0 589 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 DNAJC22Q8N4W6 341 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 CSGALNACT2Q8N6G5 542 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 FAM83FQ8NEG4 500 aaPredicted RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SDR9C7Q8NEX9 313 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 OR2L3Q8NG85 312 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 OR51G2Q8NGK0 314 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 OR5M9Q8NGP3 310 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 OR13F1Q8NGS4 319 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 OR1F12Q8NHA8 337 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 FAM81AQ8TBF8 368 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 RDH11Q8TC12 318 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SUN5Q8TC36 379 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 ELMO1Q92556 727 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 NRGNQ92686 78 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 LHX4Q969G2 390 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 MRPL24Q96A35 216 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 ZNF274Q96GC6 653 aaPredicted RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 C12orf42Q96LP6 360 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 RPRD1AQ96P16 312 aaPredicted RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SLC38A2Q96QD8 506 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 CCT8L2Q96SF2 557 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 RIOK1Q9BRS2 568 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SLC39A3Q9BRY0 314 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 TTYH2Q9BSA4 534 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 RPP25Q9BUL9 199 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 PARD6BQ9BYG5 372 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 ANKRD60Q9BZ19 345 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 IQCGQ9H095 443 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 LRRN3Q9H3W5 708 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 FBXO44Q9H4M3 255 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 FNDC4Q9H6D8 234 aaPredicted RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SYNDIG1Q9H7V2 258 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SLC25A19Q9HC21 320 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 S100A14Q9HCY8 104 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SLC2A8Q9NY64 477 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 IKZF3Q9UKT9 509 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 VANGL2Q9ULK5 521 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SLC7A7Q9UM01 511 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 RPH3ALQ9UNE2 315 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 RNF6Q9Y252 685 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 POLDIP2Q9Y2S7 368 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 RHBDD3Q9Y3P4 386 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 CSDC2Q9Y534 153 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 TIMM10BQ9Y5J6 103 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 MAP3K19Q56UN5 1328 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 STK36Q9NRP7 1315 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SALL1Q9NSC2 1324 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 A0A087WZ39 114 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 TRBV4-1A0A0J9YWV2 114 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 LOC100506127A0A0U1RQW1 187 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 OR7A17O14581 309 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 CCSO14618 274 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 CETN3O15182 167 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 STX7O15400 261 aaKnown RBP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 GLRA3O75311 464 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 TRIM3O75382 744 aaPredicted RBP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 KHDRBS3O75525 346 aaKnown RBP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 MTRF1O75570 445 aaKnown RBP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 ANXA9O76027 345 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 DFFBO76075 338 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 POP4O95707 220 aaKnown RBP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 TGM6O95932 706 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 FCER2P06734 321 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 CLTAP09496 248 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 SLC35G4P0C7Q5 338 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 IGHV4-38-2P0DP08 117 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 ANXA3P12429 323 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 XRCC1P18887 633 aaPredicted RBP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 MMP11P24347 488 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 CTNNA2P26232 953 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 U2AF2P26368 475 aaKnown RBP eCLIP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 ANXA13P27216 316 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 UGT1A5P35504 534 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 LONP1P36776 959 aaKnown RBP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 HPCAL1P37235 193 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 BRCC3P46736 316 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 FHITP49789 147 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 RAB9AP51151 201 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 NDST2P52849 883 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 LBX1P52954 281 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 ATP1B3P54709 279 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 CDH6P55285 790 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 RAG2P55895 527 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 DAOAP59103 153 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 RPL27P61353 136 aaKnown RBP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 OC90Q02509 493 aaPredicted RBP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 BST2Q10589 180 aaKnown RBP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 TRDNQ13061 729 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 SRSF9Q13242 221 aaKnown RBP eCLIP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 GANABQ14697 944 aaKnown RBP1.68□□□□□ -2.14
XRCC4-204ENST00000509268 TGFBIQ15582 683 aa1.68□□□□□ -2.14
XRCC4-204ENST00000509268 DUSP5Q16690 384 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms