RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 MMP11P24347 488 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 ATP5A1P25705 553 aaKnown RBP4.79□□□□□ -1.64
COPS3-205ENST00000463097 RPL4P36578 427 aaKnown RBP4.79□□□□□ -1.64
COPS3-205ENST00000463097 SLC1A4P43007 532 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 RIPK4P57078 832 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 OTUD4Q01804 1114 aaKnown RBP4.79□□□□□ -1.64
COPS3-205ENST00000463097 PLOD1Q02809 727 aaPredicted RBP4.79□□□□□ -1.64
COPS3-205ENST00000463097 C1orf61Q13536 156 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 ARHGAP19Q14CB8 494 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 MUC21Q5SSG8 566 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 ADAMTSL4-AS1Q5T5F5 129 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 CARD17Q5XLA6 110 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 VITQ6UXI7 678 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 C17orf47Q8NEP4 570 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 OR10A7Q8NGE5 316 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 OR1L4Q8NGR5 311 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 TBCKQ8TEA7 893 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 ANP32BQ92688 251 aaKnown RBP4.79□□□□□ -1.64
COPS3-205ENST00000463097 BADQ92934 168 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 RAB3CQ96E17 227 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 TSSK1BQ9BXA7 367 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 DUSP16Q9BY84 665 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 STRADBQ9C0K7 418 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 NXF5Q9H1B4 397 aaKnown RBP4.79□□□□□ -1.64
COPS3-205ENST00000463097 SLC17A5Q9NRA2 495 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 PLCXD1Q9NUJ7 323 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 KCNG2Q9UJ96 466 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 ZNF221Q9UK13 617 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 FBXO7Q9Y3I1 522 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 TIMM10BQ9Y5J6 103 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 GRIN2BQ13224 1484 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 FHOD3Q2V2M9 1422 aa4.79□□□□□ -1.64
COPS3-205ENST00000463097 BICRAQ9NZM4 1560 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 NLRP1Q9C000 1473 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 TRBV7-9A0A0J9YWB2 115 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 BCLAF3A2AJT9 711 aaKnown RBP4.78□□□□□ -1.64
COPS3-205ENST00000463097 MEIOCA2RUB1 952 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 NCF1BA6NI72 391 aaPredicted RBP4.78□□□□□ -1.64
COPS3-205ENST00000463097 OR6C65A6NJZ3 312 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 NCF1CA8MVU1 366 aaPredicted RBP4.78□□□□□ -1.64
COPS3-205ENST00000463097 FAM72CH0Y354 149 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 CA1P00915 261 aaPredicted RBP4.78□□□□□ -1.64
COPS3-205ENST00000463097 ALOX5P09917 674 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 ACADSP16219 412 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 PPP2R1BP30154 601 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 RFC4P35249 363 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 CAPGP40121 348 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 GSTO1P78417 241 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 TGM3Q08188 693 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 FAM76BQ5HYJ3 339 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 C6orf226Q5I0X4 101 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 DCST2Q5T1A1 773 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 LINC00242Q5T6M2 205 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 FAM72AQ5TYM5 149 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 OR2A2Q6IF42 318 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 FAM72DQ6L9T8 149 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 STAC2Q6ZMT1 411 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 CEACAM19Q7Z692 300 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 PAQR7Q86WK9 346 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 FAM72BQ86X60 149 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 TGIF2LXQ8IUE1 241 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 MFSD9Q8NBP5 474 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 SPATA4Q8NEY3 305 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 OR51G2Q8NGK0 314 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 C11orf45Q8TAV5 145 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 AENQ8WTP8 325 aaKnown RBP4.78□□□□□ -1.64
COPS3-205ENST00000463097 SCARB1Q8WTV0 552 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 ATXN7L3BQ96GX2 97 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 COPS8Q99627 209 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 MTG1Q9BT17 334 aaPredicted RBP4.78□□□□□ -1.64
COPS3-205ENST00000463097 CCDC94Q9BW85 323 aaPredicted RBP4.78□□□□□ -1.64
COPS3-205ENST00000463097 WDR13Q9H1Z4 485 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 IKZF5Q9H5V7 419 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 SP140LQ9H930 580 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 SLC2A8Q9NY64 477 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 IL36GQ9NZH8 169 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 NPTNQ9Y639 398 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 ALG6Q9Y672 507 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 KIF14Q15058 1648 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 KIAA1107Q9UPP5 1409 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 NCOA3Q9Y6Q9 1424 aa4.78□□□□□ -1.64
COPS3-205ENST00000463097 CTTNBP2Q8WZ74 1663 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 ATP10AO60312 1499 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 POLA1P09884 1462 aaPredicted RBP4.77□□□□□ -1.65
COPS3-205ENST00000463097 CC2D2AQ9P2K1 1620 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 ARHGEF33A8MVX0 844 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 G3V4G9 280 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 L7N2F9 121 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 TAPBPO15533 448 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 TRIM3O75382 744 aaPredicted RBP4.77□□□□□ -1.65
COPS3-205ENST00000463097 UPK3AO75631 287 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 CTAG2O75638 210 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 IGHG1P01857 330 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 MSNP26038 577 aaKnown RBP4.77□□□□□ -1.65
COPS3-205ENST00000463097 EPS15P42566 896 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 TPMTP51580 245 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 GNB1P62873 340 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 ZNF33BQ06732 778 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 ZIC1Q15915 447 aa4.77□□□□□ -1.65
COPS3-205ENST00000463097 SLC5A12Q1EHB4 618 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms