RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SUV39H1O43463 412 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 UGT2B17O75795 530 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 NEURL1O76050 574 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 RASAL1O95294 804 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 SERPINA1P01009 418 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 THBS1P07996 1170 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 NGFRP08138 427 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 GUSBP08236 651 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 UBTFL6P0CB48 400 aaPredicted RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 NID1P14543 1247 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 GGT1P19440 569 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 ELAVL4P26378 380 aaKnown RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 GDF1P27539 372 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 IFNA8P32881 189 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 KDELR2P33947 212 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 MSX2P35548 267 aaPredicted RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF41P51814 821 aaPredicted RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 RGS8P57771 180 aaPredicted RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 COPZ1P61923 177 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 KCNJ10P78508 379 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 FOXK1P85037 733 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 KLRB1Q12918 225 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 CEACAM7Q14002 265 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 FLOT2Q14254 428 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 FGFBP1Q14512 234 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF141Q15928 474 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 ADRM1Q16186 407 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 MTX3Q5HYI7 312 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 MRPL2Q5T653 305 aaKnown RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 C1orf146Q5VVC0 180 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 FAM180AQ6UWF9 173 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 CYP2R1Q6VVX0 501 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 YTHDF3Q7Z739 585 aaKnown RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 VRK2Q86Y07 508 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 SULF2Q8IWU5 870 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 CMIPQ8IY22 773 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF440Q8IYI8 595 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 SMYD1Q8NB12 490 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 MDS2Q8NDY4 140 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 OR2M7Q8NG81 312 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 OR4C3Q8NH37 302 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 B4GALNT2Q8NHY0 566 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF563Q8TA94 476 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 DUSP19Q8WTR2 217 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 RSRC1Q96IZ7 334 aaKnown RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 UBL7Q96S82 380 aaPredicted RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 PINK1Q9BXM7 581 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 CADM1Q9BY67 442 aaKnown RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 ANGPTL4Q9BY76 406 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 HES7Q9BYE0 225 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 SAP130Q9H0E3 1048 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 PCDHAC1Q9H158 963 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 EXO5Q9H790 373 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 FLRT3Q9NZU0 649 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 SELENONQ9NZV5 590 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 LUZP4Q9P127 313 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 GMPR2Q9P2T1 348 aaKnown RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 RPS6KB2Q9UBS0 482 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 CNOT11Q9UKZ1 510 aaKnown RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 SLC9A8Q9Y2E8 581 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 GPC6Q9Y625 555 aaPredicted RBP7.75□□□□□ -1.17
TRIM48-201ENST00000417545 V9GYQ6 96 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 IGF2RP11717 2491 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 EML6Q6ZMW3 1958 aa7.75□□□□□ -1.17
TRIM48-201ENST00000417545 DSPPQ9NZW4 1301 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 FAM166BA8MTA8 275 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 AP3D1O14617 1153 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 RRP9O43818 475 aaKnown RBP7.74□□□□□ -1.17
TRIM48-201ENST00000417545 FADS1O60427 444 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 EIF4E2O60573 245 aaKnown RBP7.74□□□□□ -1.17
TRIM48-201ENST00000417545 TRAPPC6AO75865 159 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 CRYABP02511 175 aaKnown RBP7.74□□□□□ -1.17
TRIM48-201ENST00000417545 PDGFAP04085 211 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF24P17028 368 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 PGCP20142 388 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 MSX1P28360 303 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 PRKAR1BP31321 381 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 RFC3P40938 356 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 SLC6A8P48029 635 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 CD97P48960 835 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 GZMMP51124 257 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 CBFBQ13951 182 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 LY6DQ14210 128 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 TRIM25Q14258 630 aaKnown RBP7.74□□□□□ -1.17
TRIM48-201ENST00000417545 INAQ16352 499 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 NADK2Q4G0N4 442 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 CYBRD1Q53TN4 286 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 RNF220Q5VTB9 566 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 SLC6A19Q695T7 634 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 OR5M10Q6IEU7 315 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 TMEM81Q6P7N7 255 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF836Q6ZNA1 936 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 ZNF550Q7Z398 422 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 RANBP3LQ86VV4 465 aaPredicted RBP7.74□□□□□ -1.17
TRIM48-201ENST00000417545 SLC22A16Q86VW1 577 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 SPATA24Q86W54 205 aa7.74□□□□□ -1.17
TRIM48-201ENST00000417545 PTRH1Q86Y79 214 aaKnown RBP7.74□□□□□ -1.17
TRIM48-201ENST00000417545 VANGL1Q8TAA9 524 aaPredicted RBP7.74□□□□□ -1.17
TRIM48-201ENST00000417545 RNF217Q8TC41 542 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms