RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ZCCHC12Q6PEW1 402 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 BNC2Q6ZN30 1099 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-201ENST00000311943 FRRS1Q6ZNA5 592 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 HOMEZQ8IX15 550 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 ULK2Q8IYT8 1036 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 POC1BQ8TC44 478 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 TTYH2Q9BSA4 534 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 UBQLN4Q9NRR5 601 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 RLIMQ9NVW2 624 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 B4GALT7Q9UBV7 327 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 PLEKHB1Q9UF11 243 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-201ENST00000311943 DKKL1Q9UK85 242 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 USP22Q9UPT9 525 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 CAMK2AQ9UQM7 478 aa10.91□□□□□ -0.66
SCFD1-201ENST00000311943 NKX2-6A6NCS4 301 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 H3BML4 177 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 FBP2O00757 339 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 HCRTR2O43614 444 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 SNRPB2P08579 225 aaKnown RBP10.9□□□□□ -0.66
SCFD1-201ENST00000311943 GLI4P10075 376 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 HK1P19367 917 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 CRATP43155 626 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 STX1BP61266 288 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 RPP38P78345 283 aaKnown RBP10.9□□□□□ -0.66
SCFD1-201ENST00000311943 ARHGAP11BQ3KRB8 267 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 RAET1LQ5VY80 246 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 C16orf62Q7Z3J2 963 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 NATD1Q8N6N6 113 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 GLB1L3Q8NCI6 653 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-201ENST00000311943 TNIP2Q8NFZ5 429 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 MIPOL1Q8TD10 442 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 C10orf82Q8WW14 230 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 ABTB1Q969K4 478 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-201ENST00000311943 SDCCAG3Q96C92 435 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 C1GALT1C1Q96EU7 318 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 ZNF845Q96IR2 970 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-201ENST00000311943 OR2B2Q9GZK3 357 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 ZNF350Q9GZX5 532 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 SLC38A1Q9H2H9 487 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 GMPR2Q9P2T1 348 aaKnown RBP10.9□□□□□ -0.66
SCFD1-201ENST00000311943 RNF6Q9Y252 685 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 FBN2P35556 2912 aa10.9□□□□□ -0.66
SCFD1-201ENST00000311943 A0A0G2JNJ9 132 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 LOC100653049A0A140TA62 436 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 A0A1B0GUH1 482 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 OR2M5A3KFT3 312 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 SEC14L5O43304 696 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 KRT34O76011 436 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 UBTFL6P0CB48 400 aaPredicted RBP10.89□□□□□ -0.67
SCFD1-201ENST00000311943 PEPDP12955 493 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 ATP6V1C1P21283 382 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 ACVR2AP27037 513 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 LHX2P50458 406 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 ARFIP2P53365 341 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 DLEU7Q6UYE1 221 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 COMTD1Q86VU5 262 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 IFNEQ86WN2 208 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 CHDHQ8NE62 594 aaPredicted RBP10.89□□□□□ -0.67
SCFD1-201ENST00000311943 SFXN2Q96NB2 322 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 TUBA1CQ9BQE3 449 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 NMUR2Q9GZQ4 415 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 CCDC134Q9H6E4 229 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 Q9UFV3 132 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 L3MBTL1Q9Y468 752 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 CHST2Q9Y4C5 530 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 CLIC1O00299 241 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 SCDO00767 359 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 HCN1O60741 890 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 BCHEP06276 602 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 HPGDP15428 266 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 KLK2P20151 261 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 SRD5A2P31213 254 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 RYKP34925 604 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 ATP12AP54707 1039 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 PSMD4P55036 377 aaKnown RBP10.89□□□□□ -0.67
SCFD1-201ENST00000311943 CLDN18P56856 261 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 MTPNP58546 118 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 C17orf67Q0P5P2 114 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 FOXF2Q12947 444 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 SQLEQ14534 574 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 WLSQ5T9L3 541 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 VRK2Q86Y07 508 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 ARFGAP2Q8N6H7 521 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 POU5F2Q8N7G0 328 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 OR10Q1Q8NGQ4 319 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 MOAP1Q96BY2 351 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 ITCHQ96J02 903 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 TRIB1Q96RU8 372 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 PIF1Q9H611 641 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 SAR1AQ9NR31 198 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 MRTO4Q9UKD2 239 aaKnown RBP10.89□□□□□ -0.67
SCFD1-201ENST00000311943 ICAM5Q9UMF0 924 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 ABCG2Q9UNQ0 655 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 WDR45Q9Y484 360 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 CENPEQ02224 2701 aa10.89□□□□□ -0.67
SCFD1-201ENST00000311943 TRBV5-3A0A0A0MS03 114 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 FAM90A27PA6NNH2 459 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 E9PLN8 166 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 TGM6O95932 706 aa10.88□□□□□ -0.67
SCFD1-201ENST00000311943 CCR4P51679 360 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms