RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 NIPAL3Q6P499 406 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 CXXC5Q7LFL8 322 aaKnown RBP23.28■■□□□ 1.32
ROM1-201ENST00000278833 SLC43A2Q8N370 569 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 NEDD4LQ96PU5 975 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 TOR4AQ9NXH8 423 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 ACTR10Q9NZ32 417 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 TNFRSF10DQ9UBN6 386 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 GABRPO00591 440 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 BHLHE40O14503 412 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 SOX30O94993 753 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 ZGLP1P0C6A0 271 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 HOXD12P35452 270 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 FZD5Q13467 585 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 DEFB134Q4QY38 66 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 SLC35F1Q5T1Q4 408 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 PDZK1Q5T2W1 519 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 RSBN1Q5VWQ0 802 aaPredicted RBP23.28■■□□□ 1.32
ROM1-201ENST00000278833 RNF44Q7L0R7 432 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 SHFQ7M4L6 423 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 LHFPL3Q86UP9 236 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 LNX2Q8N448 690 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 ZC3HAV1LQ96H79 300 aaKnown RBP23.28■■□□□ 1.32
ROM1-201ENST00000278833 SAMD8Q96LT4 415 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 NECAB3Q96P71 396 aaPredicted RBP23.28■■□□□ 1.32
ROM1-201ENST00000278833 SNX18Q96RF0 628 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 ZFYVE21Q9BQ24 234 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 OR52D1Q9H346 318 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 NEK6Q9HC98 313 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 TIGARQ9NQ88 270 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 H2AFY2Q9P0M6 372 aaPredicted RBP23.28■■□□□ 1.32
ROM1-201ENST00000278833 SPACA6W5XKT8 324 aa23.28■■□□□ 1.32
ROM1-201ENST00000278833 TTC28Q96AY4 2481 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 CDHR4A6H8M9 788 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 AZGP1P25311 298 aaKnown RBP23.27■■□□□ 1.32
ROM1-201ENST00000278833 HTR2AP28223 471 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 ACTR1BP42025 376 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 RNF144AP50876 292 aaPredicted RBP23.27■■□□□ 1.32
ROM1-201ENST00000278833 ACTR1AP61163 376 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 SIM1P81133 766 aaPredicted RBP23.27■■□□□ 1.32
ROM1-201ENST00000278833 CARTPTQ16568 116 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 TMPRSS11FQ6ZWK6 438 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 VWA5B2Q8N398 1253 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 OR52L1Q8NGH7 329 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 ZCCHC10Q8TBK6 192 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 FANK1Q8TC84 345 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 BMFQ96LC9 184 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 DEPDC7Q96QD5 511 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 OR2B2Q9GZK3 357 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 PPP1R3EQ9H7J1 279 aa23.27■■□□□ 1.32
ROM1-201ENST00000278833 HMX3A6NHT5 357 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 C19orf67A6NJJ6 358 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 NARSO43776 548 aaKnown RBP23.26■■□□□ 1.31
ROM1-201ENST00000278833 CH25HO95992 272 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 KRT8P05787 483 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 HNRNPA2B1P22626 353 aaKnown RBP23.26■■□□□ 1.31
ROM1-201ENST00000278833 CTBP2P56545 445 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 CLDN2P57739 230 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 FXYD6P3P58550 94 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 YPEL5P62699 121 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 NDUFA5Q16718 116 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 GARNL3Q5VVW2 1013 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 SPRYD4Q8WW59 207 aaPredicted RBP23.26■■□□□ 1.31
ROM1-201ENST00000278833 HS6ST2Q96MM7 605 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 ATF6BQ99941 703 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 SIDT1Q9NXL6 827 aaKnown RBP23.26■■□□□ 1.31
ROM1-201ENST00000278833 C10orf142B7Z368 130 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 CASKO14936 926 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 TMCC2O75069 709 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 TBXA2RP21731 343 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 CAPZA2P47755 286 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 TMEM53Q6P2H8 277 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 MZT2AQ6P582 158 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 MEPCEQ7L2J0 689 aaKnown RBP23.26■■□□□ 1.31
ROM1-201ENST00000278833 DGLUCYQ7Z3D6 616 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 BBS1Q8NFJ9 593 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 TMEM239Q8WW34 195 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 ACOT12Q8WYK0 555 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 COL26A1Q96A83 441 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 SIPA1Q96FS4 1042 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 SECISBP2Q96T21 854 aaKnown RBP23.26■■□□□ 1.31
ROM1-201ENST00000278833 CD180Q99467 661 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 RPP25Q9BUL9 199 aaKnown RBP23.26■■□□□ 1.31
ROM1-201ENST00000278833 PCDHGB7Q9Y5F8 929 aa23.26■■□□□ 1.31
ROM1-201ENST00000278833 CENPVL1A0A0U1RR11 272 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 SCAMP1O15126 338 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 RCBTB2O95199 551 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 OR1Q1Q15612 314 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 MAPK14Q16539 360 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 ATAD3CQ5T2N8 411 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 MRPL2Q5T653 305 aaKnown RBP23.25■■□□□ 1.31
ROM1-201ENST00000278833 ZNF613Q6PF04 617 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 MARCH9Q86YJ5 346 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 CPOQ8IVL8 374 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 GALNT12Q8IXK2 581 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 ACBD7Q8N6N7 88 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 SIRT6Q8N6T7 355 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 ZNF655Q8N720 491 aaPredicted RBP23.25■■□□□ 1.31
ROM1-201ENST00000278833 ADAM30Q9UKF2 790 aa23.25■■□□□ 1.31
ROM1-201ENST00000278833 SOCS6O14544 535 aa23.24■■□□□ 1.31
ROM1-201ENST00000278833 GPR75O95800 540 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms