RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 MED18Q9BUE0 208 aa14.44□□□□□ -0.1
CLN8-209ENST00000635970 FAM60AQ9NP50 221 aa14.44□□□□□ -0.1
CLN8-209ENST00000635970 SLC6A20Q9NP91 592 aa14.44□□□□□ -0.1
CLN8-209ENST00000635970 TMCC3Q9ULS5 477 aa14.44□□□□□ -0.1
CLN8-209ENST00000635970 MDC1Q14676 2089 aaKnown RBP14.44□□□□□ -0.1
CLN8-209ENST00000635970 GNG14A0A1W2PPG7 69 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 A0A1W2PQ09 198 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 C1QTNF9BB2RNN3 333 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 GASTP01350 101 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 OPN1SWP03999 348 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 C1QTNF9P0C862 333 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 PRKCAP17252 672 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 DDX5P17844 614 aaKnown RBP14.43□□□□□ -0.1
CLN8-209ENST00000635970 CPN2P22792 545 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 PTBP1P26599 531 aaKnown RBP eCLIP14.43□□□□□ -0.1
CLN8-209ENST00000635970 HBA1P69905 142 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 PDE7AQ13946 482 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 COL9A2Q14055 689 aaPredicted RBP14.43□□□□□ -0.1
CLN8-209ENST00000635970 GPR19Q15760 415 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 SLC25A30Q5SVS4 291 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 PRAMEF13Q5VWM6 474 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 CARFQ8N187 725 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 D2HGDHQ8N465 521 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 RNF175Q8N4F7 328 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.43□□□□□ -0.1
CLN8-209ENST00000635970 TEFMQ96QE5 360 aaKnown RBP14.43□□□□□ -0.1
CLN8-209ENST00000635970 OR6C1Q96RD1 312 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 UCK2Q9BZX2 261 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 NMNAT1Q9HAN9 279 aaPredicted RBP14.43□□□□□ -0.1
CLN8-209ENST00000635970 ASCL3Q9NQ33 180 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 PAQR5Q9NXK6 330 aaPredicted RBP14.43□□□□□ -0.1
CLN8-209ENST00000635970 TAS2R16Q9NYV7 291 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 SDK2Q58EX2 2172 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 NUP214P35658 2090 aaPredicted RBP14.43□□□□□ -0.1
CLN8-209ENST00000635970 IGKV1-8A0A0C4DH67 115 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 PRAMEF25A6NGN4 478 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 E7EQ34 232 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 FOXE1O00358 373 aaPredicted RBP14.43□□□□□ -0.1
CLN8-209ENST00000635970 PROM1O43490 865 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 SPTBP11277 2137 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 MYL9P24844 172 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 SMIM11AP58511 58 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 DDX39BQ13838 428 aaKnown RBP14.43□□□□□ -0.1
CLN8-209ENST00000635970 C12orf73Q69YU5 71 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 FCRL6Q6DN72 434 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 FAM131AQ6UXB0 335 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 CASP12Q6UXS9 341 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 KMT5CQ86Y97 462 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 PLCZ1Q86YW0 608 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 LAX1Q8IWV1 398 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 SLC34A3Q8N130 599 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 OR7G3Q8NG95 312 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 OR56A3Q8NH54 315 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 CREB3L4Q8TEY5 395 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 ZC3HAV1LQ96H79 300 aaKnown RBP14.43□□□□□ -0.1
CLN8-209ENST00000635970 SLC46A1Q96NT5 459 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 OR4K3Q96R72 315 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 POLR2J2Q9GZM3 115 aaKnown RBP14.43□□□□□ -0.1
CLN8-209ENST00000635970 RNF121Q9H920 327 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 PDE7BQ9NP56 450 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 ISYNA1Q9NPH2 558 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 SNTG1Q9NSN8 517 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 CUEDC1Q9NWM3 386 aaPredicted RBP14.43□□□□□ -0.1
CLN8-209ENST00000635970 SLC39A1Q9NY26 324 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 FOXJ2Q9P0K8 574 aa14.43□□□□□ -0.1
CLN8-209ENST00000635970 CFAP47Q6ZTR5 3102 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 TRBC2A0A5B9 178 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 IRGMA1A4Y4 181 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 FABP12A6NFH5 140 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 C9orf172C9J069 976 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.42□□□□□ -0.1
CLN8-209ENST00000635970 AP3D1O14617 1153 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 TPST2O60704 377 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 ENTPD6O75354 484 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 POU2F1P14859 743 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 TNFRSF1BP20333 461 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 SLC9A3P48764 834 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 COX20Q5RI15 118 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 DDI2Q5TDH0 399 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 MFSD4BQ5TF39 518 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 MED27Q6P2C8 311 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 METAP1DQ6UB28 335 aaPredicted RBP14.42□□□□□ -0.1
CLN8-209ENST00000635970 NATD1Q8N6N6 113 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 MED30Q96HR3 178 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 SGPP1Q9BX95 441 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 NIPAL2Q9H841 368 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 MRPS30Q9NP92 439 aaKnown RBP14.42□□□□□ -0.1
CLN8-209ENST00000635970 RPRD1BQ9NQG5 326 aaKnown RBP14.42□□□□□ -0.1
CLN8-209ENST00000635970 ACOXLQ9NUZ1 547 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 B3GALT1Q9Y5Z6 326 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 B4DXG7 233 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 B4E171 279 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 FAAHO00519 579 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 MYL12BO14950 172 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 ARHGEF9O43307 516 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 HCN1O60741 890 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 CTSBP07858 339 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 CMPK1P30085 196 aa14.42□□□□□ -0.1
CLN8-209ENST00000635970 CHI3L1P36222 383 aaPredicted RBP14.42□□□□□ -0.1
CLN8-209ENST00000635970 TSPAN7P41732 249 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms