RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 SDK2Q58EX2 2172 aa12.05□□□□□ -0.48
SHKBP1-209ENST00000595803 FBN2P35556 2912 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 TLN1Q9Y490 2541 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 NPIPA5A0A0B4J1W7 369 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 CDC14CA4D256 554 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 AGAP5A6NIR3 686 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 TMEM229AB2RXF0 380 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 NPIPA7E9PJI5 369 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 CLOCKO15516 846 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 HS6ST1O60243 411 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 DEAF1O75398 565 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 CST1P01037 141 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 MT-ND1P03886 318 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 THBS1P07996 1170 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 NPIPA8P0DM63 369 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 ITGA2P17301 1181 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 IL12BP29460 328 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 LCN1P31025 176 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 PRKAR1BP31321 381 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 ATP12AP54707 1039 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 DHRS4L2Q6PKH6 230 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 PIWIL3Q7Z3Z3 882 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 PRR22Q8IZ63 422 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 AMER2Q8N7J2 671 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 ZNF441Q8N8Z8 693 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 ZSCAN1Q8NBB4 408 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 GPR32P1Q8NGA4 272 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 ELP5Q8TE02 316 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 THAP3Q8WTV1 239 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 IP6K3Q96PC2 410 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 BDH2Q9BUT1 245 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 SEMA6AQ9H2E6 1030 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 LIN28AQ9H9Z2 209 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 MMP25Q9NPA2 562 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 P4HTMQ9NXG6 502 aa12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 ZNF443Q9Y2A4 671 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-209ENST00000595803 A0A1W2PQ72 361 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 hCG_2039718K7EN88 272 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 WWP2O00308 870 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 SYT5O00445 386 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 KIAA0513O60268 411 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 LGI1O95970 557 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 SEMG1P04279 462 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 IFNW1P05000 195 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 HPGDP15428 266 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 TNFRSF1BP20333 461 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 DCTP40126 519 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 OR1E2P47887 323 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 PLCXD2Q0VAA5 305 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 TGIF1Q15583 401 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 TRIP10Q15642 601 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 ATP6AP1Q15904 470 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 ZSWIM7Q19AV6 140 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 LIN52Q52LA3 116 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 EIPR1Q53HC9 387 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 ZAR1Q86SH2 424 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 CARM1Q86X55 608 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 LILRA2Q8N149 483 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 ZNF614Q8N883 585 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 TMEM102Q8N9M5 508 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 DIO2Q92813 273 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 EFHD2Q96C19 240 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 OMA1Q96E52 524 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 CENPNQ96H22 339 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 ZNF347Q96SE7 839 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 ADOQ96SZ5 270 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 DPH1Q9BZG8 443 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 DNAJB9Q9UBS3 223 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 FBXL4Q9UKA2 621 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 SLC9A8Q9Y2E8 581 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 SSUH2Q9Y2M2 353 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 PCDHGA10Q9Y5H3 936 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 NPFFR2Q9Y5X5 522 aa12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 MRPS18BQ9Y676 258 aaKnown RBP12.03□□□□□ -0.48
SHKBP1-209ENST00000595803 TSPAN2O60636 221 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 UGT2B17O75795 530 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 UTS2O95399 124 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 NAGAP17050 411 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 PNLIPRP2P54317 469 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 VLDLRP98155 873 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 EFR3AQ14156 821 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF141Q15928 474 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 MAPK14Q16539 360 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 HMBOX1Q6NT76 420 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 TCTN3Q6NUS6 607 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 CYP4Z1Q86W10 505 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 CLIP4Q8N3C7 705 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 SLC15A4Q8N697 577 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 ZNF527Q8NB42 609 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 ICA1LQ8NDH6 482 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 VANGL1Q8TAA9 524 aaPredicted RBP12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 SLC22A8Q8TCC7 542 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 C7orf34Q96L11 122 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 LMF1Q96S06 567 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 AMBRA1Q9C0C7 1298 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 EVA1AQ9H8M9 152 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 ZBTB20Q9HC78 741 aaPredicted RBP12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 UBQLN4Q9NRR5 601 aa12.02□□□□□ -0.49
SHKBP1-209ENST00000595803 AGPAT4Q9NRZ5 378 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms