RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 B3GALT5Q9Y2C3 310 aa8.01□□□□□ -1.13
SMG6-218ENST00000575454 TENM1Q9UKZ4 2725 aa8□□□□□ -1.13
SMG6-218ENST00000575454 A0A096LNT2 108 aa8□□□□□ -1.13
SMG6-218ENST00000575454 DPRXA6NFQ7 191 aa8□□□□□ -1.13
SMG6-218ENST00000575454 FAM187AA6NFU0 413 aa8□□□□□ -1.13
SMG6-218ENST00000575454 GJE1A6NN92 205 aa8□□□□□ -1.13
SMG6-218ENST00000575454 TNFSF11O14788 317 aa8□□□□□ -1.13
SMG6-218ENST00000575454 PCDH7O60245 1069 aa8□□□□□ -1.13
SMG6-218ENST00000575454 LMX1BO60663 402 aa8□□□□□ -1.13
SMG6-218ENST00000575454 NDUFS7O75251 213 aa8□□□□□ -1.13
SMG6-218ENST00000575454 NME6O75414 186 aaPredicted RBP8□□□□□ -1.13
SMG6-218ENST00000575454 PRKD3O94806 890 aa8□□□□□ -1.13
SMG6-218ENST00000575454 UTS2O95399 124 aa8□□□□□ -1.13
SMG6-218ENST00000575454 ADAP00813 363 aa8□□□□□ -1.13
SMG6-218ENST00000575454 YES1P07947 543 aa8□□□□□ -1.13
SMG6-218ENST00000575454 NGFRP08138 427 aa8□□□□□ -1.13
SMG6-218ENST00000575454 GZMKP49863 264 aa8□□□□□ -1.13
SMG6-218ENST00000575454 NCBP2P52298 156 aaKnown RBP eCLIP8□□□□□ -1.13
SMG6-218ENST00000575454 CDH11P55287 796 aa8□□□□□ -1.13
SMG6-218ENST00000575454 CAV1Q03135 178 aa8□□□□□ -1.13
SMG6-218ENST00000575454 RUNX1T1Q06455 604 aa8□□□□□ -1.13
SMG6-218ENST00000575454 ACSM2AQ08AH3 577 aa8□□□□□ -1.13
SMG6-218ENST00000575454 CSTF3Q12996 717 aaKnown RBP8□□□□□ -1.13
SMG6-218ENST00000575454 VPS26BQ4G0F5 336 aa8□□□□□ -1.13
SMG6-218ENST00000575454 SPIN4Q56A73 249 aa8□□□□□ -1.13
SMG6-218ENST00000575454 ACSM2BQ68CK6 577 aa8□□□□□ -1.13
SMG6-218ENST00000575454 BHLHA15Q7RTS1 189 aaPredicted RBP8□□□□□ -1.13
SMG6-218ENST00000575454 TRABD2AQ86V40 505 aa8□□□□□ -1.13
SMG6-218ENST00000575454 CREG2Q8IUH2 290 aa8□□□□□ -1.13
SMG6-218ENST00000575454 MISPQ8IVT2 679 aa8□□□□□ -1.13
SMG6-218ENST00000575454 SLC43A2Q8N370 569 aa8□□□□□ -1.13
SMG6-218ENST00000575454 MMGT1Q8N4V1 131 aa8□□□□□ -1.13
SMG6-218ENST00000575454 BANPQ8N9N5 519 aa8□□□□□ -1.13
SMG6-218ENST00000575454 KBTBD8Q8NFY9 601 aa8□□□□□ -1.13
SMG6-218ENST00000575454 RNF128Q8TEB7 428 aa8□□□□□ -1.13
SMG6-218ENST00000575454 FBF1Q8TES7 1133 aa8□□□□□ -1.13
SMG6-218ENST00000575454 NEUROG1Q92886 237 aa8□□□□□ -1.13
SMG6-218ENST00000575454 CPNE4Q96A23 557 aaPredicted RBP8□□□□□ -1.13
SMG6-218ENST00000575454 KLHL15Q96M94 604 aa8□□□□□ -1.13
SMG6-218ENST00000575454 ERP44Q9BS26 406 aa8□□□□□ -1.13
SMG6-218ENST00000575454 IQCGQ9H095 443 aaKnown RBP8□□□□□ -1.13
SMG6-218ENST00000575454 FARSBQ9NSD9 589 aaKnown RBP8□□□□□ -1.13
SMG6-218ENST00000575454 DDX18Q9NVP1 670 aaKnown RBP8□□□□□ -1.13
SMG6-218ENST00000575454 GRID1Q9ULK0 1009 aa8□□□□□ -1.13
SMG6-218ENST00000575454 KCNS2Q9ULS6 477 aa8□□□□□ -1.13
SMG6-218ENST00000575454 MGAT4BQ9UQ53 548 aa8□□□□□ -1.13
SMG6-218ENST00000575454 WBP11Q9Y2W2 641 aaKnown RBP8□□□□□ -1.13
SMG6-218ENST00000575454 KIAA1549Q9HCM3 1950 aa8□□□□□ -1.13
SMG6-218ENST00000575454 A0A1W2PRB8 838 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 CCDC151A5D8V7 595 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 MYO1GB0I1T2 1018 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 SHISA8B8ZZ34 492 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 ALG1L2C9J202 215 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 ULK1O75385 1050 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 PSMG1O95456 288 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 PGRP06401 933 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 IFI6P09912 130 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 HPGDP15428 266 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 DDCP20711 480 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 USF1P22415 310 aaPredicted RBP7.99□□□□□ -1.13
SMG6-218ENST00000575454 ELK4P28324 431 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 LCN1P31025 176 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 TTKP33981 857 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 RFX3P48380 749 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 PPA1Q15181 289 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 ZNF239Q16600 458 aaKnown RBP7.99□□□□□ -1.13
SMG6-218ENST00000575454 TSNAXIP1Q2TAA8 658 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 TECRLQ5HYJ1 363 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 GALNT18Q6P9A2 607 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 Q6ZT83 130 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 LILRA2Q8N149 483 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 FBXL14Q8N1E6 418 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 DEPDC4Q8N2C3 294 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 ZNF619Q8N2I2 560 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 OR2L13Q8N349 312 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 CDYL2Q8N8U2 506 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 C16orf78Q8WTQ4 265 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 FAM168AQ92567 244 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 NSUN5Q96P11 429 aaKnown RBP7.99□□□□□ -1.13
SMG6-218ENST00000575454 HBEGFQ99075 208 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 DHRS9Q9BPW9 319 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 LMF2Q9BU23 707 aaKnown RBP7.99□□□□□ -1.13
SMG6-218ENST00000575454 CACNG6Q9BXT2 260 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 RTN4RQ9BZR6 473 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 VPS11Q9H270 941 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 CBLN4Q9NTU7 201 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 MED17Q9NVC6 651 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 FLRT3Q9NZU0 649 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 DMGDHQ9UI17 866 aaKnown RBP7.99□□□□□ -1.13
SMG6-218ENST00000575454 SAR1BQ9Y6B6 198 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 SVEP1Q4LDE5 3571 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 ABCA1O95477 2261 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 ARHGAP21Q5T5U3 1957 aa7.99□□□□□ -1.13
SMG6-218ENST00000575454 MGAM2Q2M2H8 2515 aa7.98□□□□□ -1.13
SMG6-218ENST00000575454 NINQ8N4C6 2090 aa7.98□□□□□ -1.13
SMG6-218ENST00000575454 A0A0J9YW62 118 aa7.98□□□□□ -1.13
SMG6-218ENST00000575454 SHISA9B4DS77 424 aa7.98□□□□□ -1.13
SMG6-218ENST00000575454 H7C417 338 aa7.98□□□□□ -1.13
SMG6-218ENST00000575454 UPK1AO00322 258 aa7.98□□□□□ -1.13
SMG6-218ENST00000575454 MANBAO00462 879 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms