RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 PAPD5Q8NDF8 572 aaKnown RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 NR4A3Q92570 626 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 ZNF347Q96SE7 839 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 SECISBP2Q96T21 854 aaKnown RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 CDCP1Q9H5V8 836 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 ZBTB20Q9HC78 741 aaPredicted RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 IL1RAPQ9NPH3 570 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 FBXO34Q9NWN3 711 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 KLRF1Q9NZS2 232 aa11.79□□□□□ -0.52
CLK3-214ENST00000564096 C6orf203Q9P0P8 240 aaPredicted RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 STX18Q9P2W9 335 aaKnown RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 NUP214P35658 2090 aaPredicted RBP11.79□□□□□ -0.52
CLK3-214ENST00000564096 CACNA1AO00555 2505 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 CDHR4A6H8M9 788 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 PRAMEF25A6NGN4 478 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 ALG1L2C9J202 215 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 H3BNX3 289 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 GNGT2O14610 69 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 AP3D1O14617 1153 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 ADAMDEC1O15204 470 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 NKX2-8O15522 239 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 BAG2O95816 211 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 LGI1O95970 557 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 CSTAP01040 98 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 LDLRP01130 860 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 SOX3P41225 446 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 UCNP55089 124 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 FBXW4P57775 412 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 SRSF6Q13247 344 aaKnown RBP11.78□□□□□ -0.52
CLK3-214ENST00000564096 MAPK14Q16539 360 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 NTRK2Q16620 822 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 DUSP7Q16829 419 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 ATP1A1-AS1Q5TC04 95 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 FCRLBQ6BAA4 426 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 H3F3CQ6NXT2 135 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 DEF8Q6ZN54 512 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 CCDC81Q6ZN84 652 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 LRRC69Q6ZNQ3 347 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 C16orf47Q6ZP98 133 aaPredicted RBP11.78□□□□□ -0.52
CLK3-214ENST00000564096 ZNF550Q7Z398 422 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 PQLC1Q8N2U9 271 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 TMCO5AQ8N6Q1 288 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 GPR32P1Q8NGA4 272 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 OR10Q1Q8NGQ4 319 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 VANGL1Q8TAA9 524 aaPredicted RBP11.78□□□□□ -0.52
CLK3-214ENST00000564096 SGCZQ96LD1 299 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 ARHGDIGQ99819 225 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 POLR2J2Q9GZM3 115 aaKnown RBP11.78□□□□□ -0.52
CLK3-214ENST00000564096 ING2Q9H160 280 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 POLR2J3Q9H1A7 115 aaKnown RBP11.78□□□□□ -0.52
CLK3-214ENST00000564096 METTL7AQ9H8H3 244 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 GPR83Q9NYM4 423 aa11.78□□□□□ -0.52
CLK3-214ENST00000564096 TESQ9UGI8 421 aaKnown RBP11.78□□□□□ -0.52
CLK3-214ENST00000564096 CENPVL1A0A0U1RR11 272 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 hCG_2039718K7EN88 272 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 M0R3H8 397 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 GTPBP1O00178 669 aaKnown RBP11.77□□□□□ -0.53
CLK3-214ENST00000564096 EFSO43281 561 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 NDUFB5O43674 189 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 TIPRLO75663 272 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 OR6B1O95007 311 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 ANPEPP15144 967 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 ADH7P40394 386 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 SOX8P57073 446 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 GK3PQ14409 553 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 ATP6AP1Q15904 470 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 NRF1Q16656 503 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 KLHL26Q53HC5 615 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 AGAP7PQ5VUJ5 663 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 LYPD8Q6UX82 237 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 RTL4Q6ZR62 310 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 PIWIL3Q7Z3Z3 882 aaKnown RBP11.77□□□□□ -0.53
CLK3-214ENST00000564096 GRAMD2AQ8IUY3 354 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 SPACA3Q8IXA5 215 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 CYP4Z2PQ8N1L4 340 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 POGLUT1Q8NBL1 392 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 OR5M3Q8NGP4 307 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 OR4C3Q8NH37 302 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 PHOSPHO1Q8TCT1 267 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 HGDQ93099 445 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 SLCO4A1Q96BD0 722 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 SDCCAG3Q96C92 435 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 AGAP4Q96P64 663 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 BDH2Q9BUT1 245 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 OSBPL11Q9BXB4 747 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 VCX3BQ9H321 246 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 EXOSC3Q9NQT5 275 aaKnown RBP11.77□□□□□ -0.53
CLK3-214ENST00000564096 SDHAF3Q9NRP4 125 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 AGPAT4Q9NRZ5 378 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 STOML1Q9UBI4 398 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 KCNE5Q9UJ90 142 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 ENPP4Q9Y6X5 453 aa11.77□□□□□ -0.53
CLK3-214ENST00000564096 MASP2O00187 686 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 ZNF264O43296 627 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 SCO2O43819 266 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 FMO6PO60774 539 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 DNAJB5O75953 348 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 CST1P01037 141 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 MT-ND1P03886 318 aa11.76□□□□□ -0.53
CLK3-214ENST00000564096 UBTFL6P0CB48 400 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms