RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 FGF5P12034 268 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 PRG2P13727 222 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 HTR2AP28223 471 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 GRK6P43250 576 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 OMPP47874 163 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 GSSP48637 474 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 IDH2P48735 452 aaKnown RBP11.93□□□□□ -0.5
SNX1-211ENST00000560829 DCAF7P61962 342 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 ZFP36L1Q07352 338 aaKnown RBP11.93□□□□□ -0.5
SNX1-211ENST00000560829 TSPAN31Q12999 210 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 FGFBP1Q14512 234 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 NSDHLQ15738 373 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 LPAL2Q16609 132 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 SMN1Q16637 294 aaKnown RBP11.93□□□□□ -0.5
SNX1-211ENST00000560829 CNPY1Q3B7I2 92 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 NKAIN1Q4KMZ8 207 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 PDZK1Q5T2W1 519 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 C12orf73Q69YU5 71 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 XAF1Q6GPH4 301 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 MBOAT2Q6ZWT7 520 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 GPR141Q7Z602 305 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 P3H2Q8IVL5 708 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 NKAIN4Q8IVV8 208 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 CCDC103Q8IW40 242 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 NLGN4XQ8N0W4 816 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 ZNF321PQ8N8H1 164 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 STT3BQ8TCJ2 826 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 GNPDA2Q8TDQ7 276 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 IPCEF1Q8WWN9 437 aaPredicted RBP11.93□□□□□ -0.5
SNX1-211ENST00000560829 SIGLEC11Q96RL6 698 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 GPA33Q99795 319 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 PRSS27Q9BQR3 290 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 DNAJB12Q9NXW2 375 aaKnown RBP11.93□□□□□ -0.5
SNX1-211ENST00000560829 AASSQ9UDR5 926 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 MKL2Q9ULH7 1088 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 NTNG1Q9Y2I2 539 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 OR10H1Q9Y4A9 318 aa11.93□□□□□ -0.5
SNX1-211ENST00000560829 FRG2CA6NGY1 282 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 KHNYNO15037 678 aaKnown RBP11.92□□□□□ -0.5
SNX1-211ENST00000560829 KLF4O43474 513 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 BCAS1O75363 584 aaPredicted RBP11.92□□□□□ -0.5
SNX1-211ENST00000560829 LYPD3O95274 346 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 PMS2P3Q13401 168 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 IL11RAQ14626 422 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 OR1Q1Q15612 314 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 PLA2G2CQ5R387 149 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 ZNF613Q6PF04 617 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 ZNF730Q6ZMV8 503 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 PRICKLE2Q7Z3G6 844 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 LAPTM4BQ86VI4 370 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 PPP1R3BQ86XI6 285 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 PIGXQ8TBF5 258 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 CNOT9Q92600 299 aaKnown RBP11.92□□□□□ -0.5
SNX1-211ENST00000560829 ZNF559Q9BR84 538 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 OR8D2Q9GZM6 311 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 ARRDC1-AS1Q9H2J1 176 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 IMPAD1Q9NX62 359 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 SNX5Q9Y5X3 404 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 ZDBF2Q9HCK1 2354 aa11.92□□□□□ -0.5
SNX1-211ENST00000560829 OR6C76A6NM76 312 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 A8MUA0 341 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 PTGES3LE9PB15 166 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 H3BSA7 217 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 FAM20BO75063 409 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 IL33O95760 270 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 ZGLP1P0C6A0 271 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 GKN3PP0CG01 181 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 ITIH1P19827 911 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 PCMT1P22061 227 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 ACP1P24666 158 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 FPR3P25089 353 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 POU1F1P28069 291 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 LCN1P31025 176 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 RFX3P48380 749 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 DCDP81605 110 aaKnown RBP11.91□□□□□ -0.5
SNX1-211ENST00000560829 EBPQ15125 230 aaKnown RBP11.91□□□□□ -0.5
SNX1-211ENST00000560829 TMEM236Q5W0B7 351 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 RRM2BQ7LG56 351 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 RNF113BQ8IZP6 322 aaKnown RBP11.91□□□□□ -0.5
SNX1-211ENST00000560829 ZNF540Q8NDQ6 660 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 OR1N1Q8NGS0 311 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 TRUB1Q8WWH5 349 aaKnown RBP11.91□□□□□ -0.5
SNX1-211ENST00000560829 ADIPOR1Q96A54 375 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 LCORQ96JN0 433 aaPredicted RBP11.91□□□□□ -0.5
SNX1-211ENST00000560829 NUDT9Q9BW91 350 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 HOXD1Q9GZZ0 328 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 SMOC1Q9H4F8 434 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 FKBP14Q9NWM8 211 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 SLC7A7Q9UM01 511 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 ASXL3Q9C0F0 2248 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 SH3D21A4FU49 640 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 VSTM2BA6NLU5 285 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 H3BN98 237 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 ZNF701M0R085 212 aaPredicted RBP11.91□□□□□ -0.5
SNX1-211ENST00000560829 SOX14O95416 240 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 ADH7P40394 386 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 ACAA2P42765 397 aaKnown RBP11.91□□□□□ -0.5
SNX1-211ENST00000560829 SNRPGP62308 76 aaKnown RBP11.91□□□□□ -0.5
SNX1-211ENST00000560829 OCA2Q04671 838 aa11.91□□□□□ -0.5
SNX1-211ENST00000560829 TUBA3CQ13748 450 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms