RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 CTSSP25774 331 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 CCT3P49368 545 aaKnown RBP7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 CLK3P49761 638 aaKnown RBP7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 CLDN15P56746 228 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 C17orf67Q0P5P2 114 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 MAD2L1Q13257 205 aaPredicted RBP7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 RCAN2Q14206 197 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 GANABQ14697 944 aaKnown RBP7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 LASP1Q14847 261 aaKnown RBP7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 BCL2A1Q16548 175 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 TMEM44Q2T9K0 475 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 LSM12Q3MHD2 195 aaKnown RBP7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 FBXL19-AS1Q494R0 122 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 HHATQ5VTY9 493 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 AAGABQ6PD74 315 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 FIGNL1Q6PIW4 674 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 PLXDC2Q6UX71 529 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 CAMKMTQ7Z624 323 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 ANKRD42Q8N9B4 389 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 SFXN5Q8TD22 340 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 C1GALT1C1Q96EU7 318 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 DTNBP1Q96EV8 351 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 STACQ99469 402 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 PRPF18Q99633 342 aaKnown RBP7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 SH3GL2Q99962 352 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 PAIP2Q9BPZ3 127 aaKnown RBP7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 DUSP26Q9BV47 211 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 BTBD2Q9BX70 525 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 TBL1XR1Q9BZK7 514 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 BHLHE41Q9C0J9 482 aaPredicted RBP7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 PIGUQ9H490 435 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 MCCC2Q9HCC0 563 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 DUSP22Q9NRW4 184 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 ATAD3AQ9NVI7 634 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 GPATCH2Q9NW75 528 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 GIN1Q9NXP7 522 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 NOP53Q9NZM5 478 aaKnown RBP7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 CLCF1Q9UBD9 225 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 ZNF337Q9Y3M9 751 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 L3MBTL1Q9Y468 752 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 SNX8Q9Y5X2 465 aa7.94□□□□□ -1.14
SNRPA1-206ENST00000558059 FREM1Q5H8C1 2179 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 MED13LQ71F56 2210 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 TMEM120BA0PK00 339 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 OR2M5A3KFT3 312 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 ANKRD28O15084 1053 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 HCRTR2O43614 444 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 SCN2BO60939 215 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 RCBTB2O95199 551 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 IL18BPO95998 194 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 PEPDP12955 493 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 LCN1P31025 176 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 PRIM2P49643 509 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 ASCL1P50553 236 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 AGFG1P52594 562 aaKnown RBP7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 SUCLG1P53597 346 aaKnown RBP7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 SLC18A1P54219 525 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 HBA1P69905 142 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 PHC1P78364 1004 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 POU6F2P78424 691 aaPredicted RBP7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 FOXF2Q12947 444 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 TP53BP2Q13625 1128 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 SNTB1Q13884 538 aaKnown RBP7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 PGS1Q32NB8 556 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 GLYR1Q49A26 553 aaPredicted RBP7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 CCNJQ5T5M9 372 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 OR4F3Q6IEY1 312 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 CDC73Q6P1J9 531 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 ARSKQ6UWY0 536 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 KIRREL3Q8IZU9 778 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 COX18Q8N8Q8 333 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 OR8J2Q8NGG1 315 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 OR56A1Q8NGH5 318 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 OR5M1Q8NGP8 315 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 JADE3Q92613 823 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 CDS1Q92903 461 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 RNASE6Q93091 150 aaKnown RBP7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 TLCD1Q96CP7 247 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 KLHDC3Q9BQ90 382 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 ACTRT3Q9BYD9 372 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 NUF2Q9BZD4 464 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 PTGES2Q9H7Z7 377 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 MEAF6Q9HAF1 191 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 TMBIM4Q9HC24 238 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 UBQLN4Q9NRR5 601 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 JKAMPQ9P055 326 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 KCNN3Q9UGI6 736 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 KCNE3Q9Y6H6 103 aa7.93□□□□□ -1.14
SNRPA1-206ENST00000558059 ROS1P08922 2347 aa7.92□□□□□ -1.14
SNRPA1-206ENST00000558059 SHISA8B8ZZ34 492 aa7.92□□□□□ -1.14
SNRPA1-206ENST00000558059 NPIPB9F8W1W9 429 aa7.92□□□□□ -1.14
SNRPA1-206ENST00000558059 H0YC42 278 aa7.92□□□□□ -1.14
SNRPA1-206ENST00000558059 LINC01387J3KSC0 135 aa7.92□□□□□ -1.14
SNRPA1-206ENST00000558059 RNASET2O00584 256 aaKnown RBP7.92□□□□□ -1.14
SNRPA1-206ENST00000558059 SDHDO14521 159 aa7.92□□□□□ -1.14
SNRPA1-206ENST00000558059 CFLARO15519 480 aa7.92□□□□□ -1.14
SNRPA1-206ENST00000558059 NDUFB5O43674 189 aa7.92□□□□□ -1.14
SNRPA1-206ENST00000558059 GMFGO60234 142 aa7.92□□□□□ -1.14
SNRPA1-206ENST00000558059 SNNO75324 88 aaPredicted RBP7.92□□□□□ -1.14
SNRPA1-206ENST00000558059 ERLIN1O75477 346 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms