RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CMTM3Q96MX0 182 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 GFM1Q96RP9 751 aaKnown RBP12.37□□□□□ -0.43
UBE3B-209ENST00000539584 GHITMQ9H3K2 345 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 GALNT9Q9HCQ5 603 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 MRPS30Q9NP92 439 aaKnown RBP12.37□□□□□ -0.43
UBE3B-209ENST00000539584 ATP13A2Q9NQ11 1180 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 ENAMQ9NRM1 1142 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 ELF5Q9UKW6 265 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-209ENST00000539584 TBX21Q9UL17 535 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 ZFR2Q9UPR6 939 aaKnown RBP12.37□□□□□ -0.43
UBE3B-209ENST00000539584 CHST2Q9Y4C5 530 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 ATG4BQ9Y4P1 393 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 A0A0A6YYJ9 748 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 IGKV1-8A0A0C4DH67 115 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 PGRMC2O15173 223 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 PLOD3O60568 738 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 RCBTB2O95199 551 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 CH25HO95992 272 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 SERPINA3P01011 423 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 HNRNPA1P09651 372 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBE3B-209ENST00000539584 CLCNKAP51800 687 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 TLE2Q04725 743 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 AGERQ15109 404 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 NTRK2Q16620 822 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 CEP78Q5JTW2 689 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 C6orf132Q5T0Z8 1188 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 PRPF38BQ5VTL8 546 aaKnown RBP12.37□□□□□ -0.43
UBE3B-209ENST00000539584 AMIGO1Q86WK6 493 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 ETFBKMTQ8IXQ9 262 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 LNX2Q8N448 690 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 SIRT6Q8N6T7 355 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 OR51G2Q8NGK0 314 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 PMM1Q92871 262 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 HGDQ93099 445 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 ZNF681Q96N22 645 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 FCRL4Q96PJ5 515 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 FERD3LQ96RJ6 166 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 CITED4Q96RK1 184 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 CD180Q99467 661 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 DHRS9Q9BPW9 319 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 AICDAQ9GZX7 198 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 ABRACLQ9P1F3 81 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 ZNF443Q9Y2A4 671 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-209ENST00000539584 TMEM5Q9Y2B1 443 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 GPR55Q9Y2T6 319 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-209ENST00000539584 PRKAB1Q9Y478 270 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 PCYT1BQ9Y5K3 369 aaPredicted RBP12.37□□□□□ -0.43
UBE3B-209ENST00000539584 CSNK1G3Q9Y6M4 447 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 LTBP2Q14767 1821 aa12.37□□□□□ -0.43
UBE3B-209ENST00000539584 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 DAPL1A0PJW8 107 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 UNC119BA6NIH7 251 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 FABP7O15540 132 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 STX11O75558 287 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 SC5DO75845 299 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 UBL3O95164 117 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 THBS2P35442 1172 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 BCL6P41182 706 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 MMP15P51511 669 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 AGFG1P52594 562 aaKnown RBP12.36□□□□□ -0.43
UBE3B-209ENST00000539584 METAP1P53582 386 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 ACTC1P68032 377 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 ACTA1P68133 377 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 POU4F2Q12837 409 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 DUSP8Q13202 625 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 PLPP4Q5VZY2 271 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 PXKQ7Z7A4 578 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 NRROSQ86YC3 692 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 SLC44A3Q8N4M1 653 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 OR4M1Q8NGD0 313 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 ZNF431Q8TF32 576 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-209ENST00000539584 ADAMTS14Q8WXS8 1223 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 GIMAP5Q96F15 307 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 MS4A4EQ96PG1 132 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 TEX101Q9BY14 249 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 QRSL1Q9H0R6 528 aaKnown RBP12.36□□□□□ -0.43
UBE3B-209ENST00000539584 HAO2Q9NYQ3 351 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 BAIAP2Q9UQB8 552 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 AUP1Q9Y679 476 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 KCNE3Q9Y6H6 103 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 PLXND1Q9Y4D7 1925 aa12.36□□□□□ -0.43
UBE3B-209ENST00000539584 TRAV1-2A0A0B4J238 106 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 A0A1W2PQ72 361 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 TRAPPC13A5PLN9 417 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 ANTXRLA6NF34 631 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 AKR7A2O43488 359 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 FMO6PO60774 539 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 MC3RP41968 323 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 GPR4P46093 362 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 PER3P56645 1201 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 CCDC85BQ15834 202 aaPredicted RBP12.35□□□□□ -0.43
UBE3B-209ENST00000539584 ARHGAP11BQ3KRB8 267 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 PUS10Q3MIT2 529 aaKnown RBP12.35□□□□□ -0.43
UBE3B-209ENST00000539584 SLC22A10Q63ZE4 541 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 TEX261Q6UWH6 196 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 OLIG3Q7RTU3 272 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 CDK20Q8IZL9 346 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 SAMD12Q8N8I0 201 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 BBS1Q8NFJ9 593 aa12.35□□□□□ -0.43
UBE3B-209ENST00000539584 OR8K5Q8NH50 307 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms