RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 LSM12Q3MHD2 195 aaKnown RBP16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 FBXW10Q5XX13 1052 aa16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 ZAR1Q86SH2 424 aa16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 OR5P2Q8WZ92 322 aa16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 SMPDL3BQ92485 455 aa16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 OTUB1Q96FW1 271 aaPredicted RBP16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 PINK1Q9BXM7 581 aa16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 UBQLN4Q9NRR5 601 aa16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 FBXO34Q9NWN3 711 aa16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 GALNT8Q9NY28 637 aa16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 STOML1Q9UBI4 398 aa16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 PACSIN3Q9UKS6 424 aa16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 EIF3LQ9Y262 564 aaKnown RBP16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 AP4B1Q9Y6B7 739 aa16.02■□□□□ 0.16
AP003555.3-201ENST00000534086 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 WDR91A4D1P6 747 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 A8MXE2 369 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 TNFSF13O75888 250 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 HMGN2P05204 90 aaKnown RBP16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 CD1EP15812 388 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 CCT3P49368 545 aaKnown RBP16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 IST1P53990 364 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 CLDN20P56880 219 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 RPS3AP61247 264 aaKnown RBP16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 ZNF844Q08AG5 666 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 LASP1Q14847 261 aaKnown RBP16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 EXOSC6Q5RKV6 272 aaKnown RBP16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 CCNJQ5T5M9 372 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 CDC20BQ86Y33 519 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 KRTCAP2Q8N6L1 136 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 CNEP1R1Q8N9A8 125 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 GATSQ8NAP1 163 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 NUDT8Q8WV74 236 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 FIG4Q92562 907 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 COQ8BQ96D53 544 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 PKNOX2Q96KN3 472 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 STACQ99469 402 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 BTBD2Q9BX70 525 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 LIME1Q9H400 295 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 DUSP22Q9NRW4 184 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 EDARQ9UNE0 448 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 VDAC3Q9Y277 283 aa16.01■□□□□ 0.15
AP003555.3-201ENST00000534086 A0A087WZY1 265 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 SHISA8B8ZZ34 492 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 SCDO00767 359 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 MSTNO14793 375 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 ITM2AO43736 263 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 ZNF500O60304 480 aaPredicted RBP16■□□□□ 0.15
AP003555.3-201ENST00000534086 SMNDC1O75940 238 aaKnown RBP eCLIP16■□□□□ 0.15
AP003555.3-201ENST00000534086 C6orf47O95873 294 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 SERPINE1P05121 402 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 MAD2L1Q13257 205 aaPredicted RBP16■□□□□ 0.15
AP003555.3-201ENST00000534086 CHI3L2Q15782 390 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 TMEM44Q2T9K0 475 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 SPDYE7PQ495Y7 208 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 PSMA8Q8TAA3 256 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 CDS1Q92903 461 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 NINJ1Q92982 152 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 STARD4Q96DR4 205 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 ACTRT3Q9BYD9 372 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 PIGUQ9H490 435 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 CXorf36Q9H7Y0 433 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 GIN1Q9NXP7 522 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 ST6GALNAC2Q9UJ37 374 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 FAF1Q9UNN5 650 aaPredicted RBP16■□□□□ 0.15
AP003555.3-201ENST00000534086 ZNF175Q9Y473 711 aa16■□□□□ 0.15
AP003555.3-201ENST00000534086 NUP214P35658 2090 aaPredicted RBP15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 HRNRQ86YZ3 2850 aaPredicted RBP15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 AKAP6Q13023 2319 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 BIRC5O15392 142 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 CFLARO15519 480 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 G6PDP11413 515 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 ABCE1P61221 599 aaKnown RBP15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 EMX2Q04743 252 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 TP53BP2Q13625 1128 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 PON3Q15166 354 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 SGCBQ16585 318 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 CDC73Q6P1J9 531 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 VWA1Q6PCB0 445 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 MISPQ8IVT2 679 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 RIMKLAQ8IXN7 391 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 OR56A1Q8NGH5 318 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 FNDC9Q8TBE3 224 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 ADAMTS15Q8TE58 950 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 PGM2Q96G03 612 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 SH3YL1Q96HL8 342 aaPredicted RBP15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 ZNF845Q96IR2 970 aaPredicted RBP15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 DACH2Q96NX9 599 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 ZIM3Q96PE6 472 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 DUSP26Q9BV47 211 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 BHLHE41Q9C0J9 482 aaPredicted RBP15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 CENPHQ9H3R5 247 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 ZNF395Q9H8N7 513 aaPredicted RBP15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 SSU72Q9NP77 194 aaKnown RBP15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 CCM2LQ9NUG4 571 aaPredicted RBP15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 NDRG3Q9UGV2 375 aa15.99■□□□□ 0.15
AP003555.3-201ENST00000534086 A0A1W2PQD3 144 aa15.98■□□□□ 0.15
AP003555.3-201ENST00000534086 SH3D21A4FU49 640 aa15.98■□□□□ 0.15
AP003555.3-201ENST00000534086 TM9SF1O15321 606 aa15.98■□□□□ 0.15
AP003555.3-201ENST00000534086 SOX30O94993 753 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms