RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 BAG5Q9UL15 447 aa5□□□□□ -1.61
SCARNA16.4-201ENST00000516956 PRPF19Q9UMS4 504 aaKnown RBP5□□□□□ -1.61
SCARNA16.4-201ENST00000516956 PCDHGA10Q9Y5H3 936 aa5□□□□□ -1.61
SCARNA16.4-201ENST00000516956 WIF1Q9Y5W5 379 aa5□□□□□ -1.61
SCARNA16.4-201ENST00000516956 KCNE3Q9Y6H6 103 aa5□□□□□ -1.61
SCARNA16.4-201ENST00000516956 CROCCQ5TZA2 2017 aa5□□□□□ -1.61
SCARNA16.4-201ENST00000516956 ACACBO00763 2458 aa5□□□□□ -1.61
SCARNA16.4-201ENST00000516956 CCDC88CQ9P219 2028 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 A0A087WZY1 265 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TRBV5-3A0A0A0MS03 114 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 NPIPA5A0A0B4J1W7 369 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 A0A1W2PQD3 144 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 C2orf72A6NCS6 295 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 FAM166BA8MTA8 275 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 ALG1L2C9J202 215 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 NPIPA7E9PJI5 369 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 M0QX08 132 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 CXCR6O00574 342 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 AP3D1O14617 1153 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 SUV39H1O43463 412 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 KIAA0513O60268 411 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 EIF4E2O60573 245 aaKnown RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 FCMRO60667 390 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TNFRSF21O75509 655 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 DNAJC8O75937 253 aaPredicted RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 NEURL1O76050 574 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 ZNF682O95780 498 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 IGKV1D-16P01601 117 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 THBS1P07996 1170 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 NGFRP08138 427 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 NUDT7P0C024 238 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 LINGO3P0C6S8 592 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 NPIPA8P0DM63 369 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 BMP2P12643 396 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 GP1BBP13224 206 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 ETS2P15036 469 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 CD1EP15812 388 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TCN1P20061 433 aaPredicted RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 PGCP20142 388 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 ME2P23368 584 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 PTPN6P29350 595 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 AQP1P29972 269 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 SOX18P35713 384 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 MAP3K8P41279 467 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 SLC6A8P48029 635 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 GSK3BP49841 420 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 CASP6P55212 293 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 BNIP2Q12982 314 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 CBFBQ13951 182 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 VEZF1Q14119 521 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 SELPLGQ14242 412 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 NADK2Q4G0N4 442 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 LRRC23Q53EV4 343 aaPredicted RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 RPS26P11Q5JNZ5 115 aaPredicted RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 PDZK1Q5T2W1 519 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TIGD3Q6B0B8 471 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 GLYATQ6IB77 296 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 OR5M10Q6IEU7 315 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TYW3Q6IPR3 259 aaKnown RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TMEM81Q6P7N7 255 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 FRRS1Q6ZNA5 592 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 RINLQ6ZS11 566 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 FKBP9P1Q75LS8 142 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 CHMP1BQ7LBR1 199 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 PRICKLE2Q7Z3G6 844 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 RANBP3LQ86VV4 465 aaPredicted RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 CYP4Z1Q86W10 505 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 ATCAYQ86WG3 371 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 PLCZ1Q86YW0 608 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 MSRB3Q8IXL7 192 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 SLC15A3Q8IY34 581 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 C10orf67Q8IYJ2 551 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 CISD2Q8N5K1 135 aaKnown RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 RNF148Q8N7C7 305 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 RBMXL3Q8N7X1 1067 aaKnown RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 RBM15BQ8NDT2 890 aaKnown RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 OR2M7Q8NG81 312 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 OR4C3Q8NH37 302 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 GRHL3Q8TE85 626 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TMEM234Q8WY98 164 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 HOXB13Q92826 284 aaPredicted RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 SCMH1Q96GD3 660 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TMEM41AQ96HV5 264 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TPD52L3Q96J77 140 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 NSMCE2Q96MF7 247 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 RNF145Q96MT1 663 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 RAB3IPQ96QF0 476 aaPredicted RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TREX2Q9BQ50 279 aaPredicted RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 GPATCH1Q9BRR8 931 aaKnown RBP4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 BTBD10Q9BSF8 475 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TRIM8Q9BZR9 551 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 TRIM4Q9C037 500 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 ZNF350Q9GZX5 532 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 C1orf21Q9H246 121 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 MUC13Q9H3R2 512 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 DSN1Q9H410 356 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 SERHL2Q9H4I8 314 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 BCL2L10Q9HD36 194 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 SERINC1Q9NRX5 453 aa4.99□□□□□ -1.61
SCARNA16.4-201ENST00000516956 OLAHQ9NV23 265 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms